Principles for integrative structural biology studies
Integrative structure determination is a powerful approach to modeling the structures of
biological systems based on data produced by multiple experimental and theoretical …
biological systems based on data produced by multiple experimental and theoretical …
Leveraging crosslinking mass spectrometry in structural and cell biology
Crosslinking mass spectrometry (crosslinking-MS) is a versatile tool providing structural
insights into protein conformation and protein-protein interactions. Its medium-resolution …
insights into protein conformation and protein-protein interactions. Its medium-resolution …
Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement
We describe a general approach for refining protein structure models on the basis of cryo-
electron microscopy maps with near-atomic resolution. The method integrates Monte Carlo …
electron microscopy maps with near-atomic resolution. The method integrates Monte Carlo …
[BOOK][B] Introduction to proteins: structure, function, and motion
Introduction to Proteins provides a comprehensive and state-of-the-art introduction to the
structure, function, and motion of proteins for students, faculty, and researchers at all levels …
structure, function, and motion of proteins for students, faculty, and researchers at all levels …
[HTML][HTML] Hybrid methods for combined experimental and computational determination of protein structure
Knowledge of protein structure is paramount to the understanding of biological function,
develo** new therapeutics, and making detailed mechanistic hypotheses. Therefore …
develo** new therapeutics, and making detailed mechanistic hypotheses. Therefore …
Accurate global and local 3D alignment of cryo-EM density maps using local spatial structural features
Advances in cryo-electron microscopy (cryo-EM) imaging technologies have led to a rapidly
increasing number of cryo-EM density maps. Alignment and comparison of density maps …
increasing number of cryo-EM density maps. Alignment and comparison of density maps …
Development of a prototype system for archiving integrative/hybrid structure models of biological macromolecules
Essential processes in biology are carried out by large macromolecular assemblies, whose
structures are often difficult to determine by traditional methods. Increasingly, researchers …
structures are often difficult to determine by traditional methods. Increasingly, researchers …
EM-fold: de novo atomic-detail protein structure determination from medium-resolution density maps
Electron density maps of membrane proteins or large macromolecular complexes are
frequently only determined at medium resolution between 4 Å and 10 Å, either by cryo …
frequently only determined at medium resolution between 4 Å and 10 Å, either by cryo …
[HTML][HTML] Improved metrics for comparing structures of macromolecular assemblies determined by 3D electron-microscopy
Recent developments in 3-dimensional electron microcopy (3D-EM) techniques and a
concomitant drive to look at complex molecular structures, have led to a rapid increase in the …
concomitant drive to look at complex molecular structures, have led to a rapid increase in the …
Advances in structure modeling methods for cryo-electron microscopy maps
Cryo-electron microscopy (cryo-EM) has now become a widely used technique for structure
determination of macromolecular complexes. For modeling molecular structures from …
determination of macromolecular complexes. For modeling molecular structures from …