Structural biology of CRISPR–Cas immunity and genome editing enzymes

JY Wang, P Pausch, JA Doudna - Nature Reviews Microbiology, 2022 - nature.com
CRISPR–Cas systems provide resistance against foreign mobile genetic elements and have
a wide range of genome editing and biotechnological applications. In this Review, we …

The biology of CRISPR-Cas: backward and forward

F Hille, H Richter, SP Wong, M Bratovič, S Ressel… - Cell, 2018 - cell.com
In bacteria and archaea, clustered regularly interspaced short palindromic repeats
(CRISPR) and CRISPR-associated (Cas) proteins constitute an adaptive immune system …

Molecular mechanisms of CRISPR–Cas spacer acquisition

J McGinn, LA Marraffini - Nature Reviews Microbiology, 2019 - nature.com
Many bacteria and archaea have the unique ability to heritably alter their genomes by
incorporating small fragments of foreign DNA, called spacers, into CRISPR loci. Once …

Molecular mechanisms of CRISPR-Cas immunity in bacteria

PM Nussenzweig, LA Marraffini - Annual review of genetics, 2020 - annualreviews.org
Prokaryotes have developed numerous defense strategies to combat the constant threat
posed by the diverse genetic parasites that endanger them. Clustered regularly interspaced …

Multiplex recording of cellular events over time on CRISPR biological tape

RU Sheth, SS Yim, FL Wu, HH Wang - Science, 2017 - science.org
Although dynamics underlie many biological processes, our ability to robustly and
accurately profile time-varying biological signals and regulatory programs remains limited …

RPA/CRISPR/Cas12a-Based On-Site and Rapid Nucleic Acid Detection of Toxoplasma gondii in the Environment

R Lei, L Li, P Wu, X Fei, Y Zhang, J Wang… - ACS synthetic …, 2022 - ACS Publications
Toxoplasma gondii is an opportunistic pathogen widely distributed within the world, poses a
huge threat to human health, and causes significant economic losses to the livestock …

Systematic prediction of genes functionally linked to CRISPR-Cas systems by gene neighborhood analysis

SA Shmakov, KS Makarova, YI Wolf… - Proceedings of the …, 2018 - pnas.org
The CRISPR-Cas systems of bacterial and archaeal adaptive immunity consist of direct
repeat arrays separated by unique spacers and multiple CRISPR-associated (cas) genes …

Selective endpoint visualized detection of Vibrio parahaemolyticus with CRISPR/Cas12a assisted PCR using thermal cycler for on-site application

M Zhang, C Liu, Y Shi, J Wu, J Wu, H Chen - Talanta, 2020 - Elsevier
Vibrio parahaemolyticus is a major cause of seafood-associated food poisoning. It is of great
significance to develop an accurate, simple and cost-effective method to identify infected …

Advances in CRISPR-Cas systems for RNA targeting, tracking and editing

F Wang, L Wang, X Zou, S Duan, Z Li, Z Deng… - Biotechnology …, 2019 - Elsevier
Clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated
protein (Cas) systems, especially type II (Cas9) systems, have been widely used in …

DNA interference and beyond: structure and functions of prokaryotic Argonaute proteins

L Lisitskaya, AA Aravin, A Kulbachinskiy - Nature communications, 2018 - nature.com
Recognition and repression of RNA targets by Argonaute proteins guided by small RNAs is
the essence of RNA interference in eukaryotes. Argonaute proteins with diverse structures …