Recent advances in understanding enteric pathogenic Escherichia coli

MA Croxen, RJ Law, R Scholz… - Clinical microbiology …, 2013 - journals.asm.org
Although Escherichia coli can be an innocuous resident of the gastrointestinal tract, it also
has the pathogenic capacity to cause significant diarrheal and extraintestinal diseases …

E. coli as an All-Rounder: The Thin Line Between Commensalism and Pathogenicity

A Leimbach, J Hacker, U Dobrindt - Between pathogenicity and …, 2013 - Springer
Escherichia coli is a paradigm for a versatile bacterial species which comprises harmless
commensal as well as different pathogenic variants with the ability to either cause intestinal …

Origins of the E. coli Strain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

DA Rasko, DR Webster, JW Sahl… - … England Journal of …, 2011 - Mass Medical Soc
Background A large outbreak of diarrhea and the hemolytic–uremic syndrome caused by an
unusual serotype of Shiga-toxin–producing Escherichia coli (O104: H4) began in Germany …

NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats

JW Sahl, D Lemmer, J Travis, JM Schupp… - Microbial …, 2016 - microbiologyresearch.org
Whole-genome sequencing (WGS) of bacterial isolates has become standard practice in
many laboratories. Applications for WGS analysis include phylogeography and molecular …

Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing?

RM Robins-Browne, KE Holt, DJ Ingle… - Frontiers in cellular …, 2016 - frontiersin.org
The empirical and pragmatic nature of diagnostic microbiology has given rise to several
different schemes to subtype E. coli, including bioty**, seroty**, and pathoty**. These …

The evolution of the Escherichia coli phylogeny

RR Chaudhuri, IR Henderson - Infection, Genetics and Evolution, 2012 - Elsevier
Escherichia coli is familiar to biologists as a classical model system, ubiquitous in molecular
biology laboratories around the world. Outside of the laboratory, E. coli strains exist as an …

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

JW Sahl, JG Caporaso, DA Rasko, P Keim - PeerJ, 2014 - peerj.com
Background. As whole genome sequence data from bacterial isolates becomes cheaper to
generate, computational methods are needed to correlate sequence data with biological …

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution

A von Mentzer, TR Connor, LH Wieler, T Semmler… - Nature …, 2014 - nature.com
Enterotoxigenic Escherichia coli (ETEC), a major cause of infectious diarrhea, produce heat-
stable and/or heat-labile enterotoxins and at least 25 different colonization factors that target …

Enterotoxigenic Escherichia coli Infections

JM Fleckenstein, FM Kuhlmann - Current infectious disease reports, 2019 - Springer
Abstract Purpose of Review Review recent developments pertaining to the epidemiology,
molecular pathogenesis, and sequelae of enterotoxigenic Escherichia coli (ETEC) infections …

Genetic determinants of heat resistance in Escherichia coli

RG Mercer, J Zheng, R Garcia-Hernandez… - Frontiers in …, 2015 - frontiersin.org
Escherichia coli AW1. 7 is a heat resistant food isolate and the occurrence of pathogenic
strains with comparable heat resistance may pose a risk to food safety. To identify the …