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The Landscape of long noncoding RNA classification
GS Laurent, C Wahlestedt, P Kapranov - Trends in genetics, 2015 - cell.com
Advances in the depth and quality of transcriptome sequencing have revealed many new
classes of long noncoding RNAs (lncRNAs). lncRNA classification has mushroomed to …
classes of long noncoding RNAs (lncRNAs). lncRNA classification has mushroomed to …
Biogenesis, identification, and function of exonic circular RNAs
Circular RNAs (circRNAs) arise during post‐transcriptional processes, in which a single‐
stranded RNA molecule forms a circle through covalent binding. Previously, circRNA …
stranded RNA molecule forms a circle through covalent binding. Previously, circRNA …
[BOK][B] Genetics and philosophy: An introduction
P Griffiths, K Stotz - 2013 - books.google.com
In the past century, nearly all of the biological sciences have been directly affected by
discoveries and developments in genetics, a fast-evolving subject with important theoretical …
discoveries and developments in genetics, a fast-evolving subject with important theoretical …
Transcription factories: genome organization and gene regulation
A Papantonis, PR Cook - Chemical reviews, 2013 - ACS Publications
All eukaryotic cells contain four RNA polymerases originally defined by their sensitivity to
different drugs, and now by the sets of genes they transcribe. 1− 4 Polymerase I produces …
different drugs, and now by the sets of genes they transcribe. 1− 4 Polymerase I produces …
Discovering and understanding oncogenic gene fusions through data intensive computational approaches
Although gene fusions have been recognized as important drivers of cancer for decades,
our understanding of the prevalence and function of gene fusions has been revolutionized …
our understanding of the prevalence and function of gene fusions has been revolutionized …
Emerging roles of long non-coding RNAs in breast cancer biology and management
Breast cancer is the most common cancer in women with the highest mortality among this
gender. Despite treatment strategies including surgery, hormone therapy and targeted …
gender. Despite treatment strategies including surgery, hormone therapy and targeted …
Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts
Chimeric RNAs comprise exons from two or more different genes and have the potential to
encode novel proteins that alter cellular phenotypes. To date, numerous putative chimeric …
encode novel proteins that alter cellular phenotypes. To date, numerous putative chimeric …
What does our genome encode?
JA Stamatoyannopoulos - Genome research, 2012 - genome.cshlp.org
In its first production phase, The ENCODE Project Consortium (ENCODE) has generated
thousands of genome-scale data sets, resulting in a genomic “parts list” that encompasses …
thousands of genome-scale data sets, resulting in a genomic “parts list” that encompasses …
Integrative transcriptome sequencing identifies trans-splicing events with important roles in human embryonic stem cell pluripotency
Trans-splicing is a post-transcriptional event that joins exons from separate pre-mRNAs.
Detection of trans-splicing is usually severely hampered by experimental artifacts and …
Detection of trans-splicing is usually severely hampered by experimental artifacts and …
Integrative transcriptome sequencing reveals extensive alternative trans-splicing and cis-backsplicing in human cells
Transcriptionally non-co-linear (NCL) transcripts can originate from trans-splicing (trans-
spliced RNA;'tsRNA') or cis-backsplicing (circular RNA;'circRNA'). While numerous circRNAs …
spliced RNA;'tsRNA') or cis-backsplicing (circular RNA;'circRNA'). While numerous circRNAs …