Computational network inference for bacterial interactomics
K James, J Muñoz-Muñoz - Msystems, 2022 - Am Soc Microbiol
Since the large-scale experimental characterization of protein–protein interactions (PPIs) is
not possible for all species, several computational PPI prediction methods have been …
not possible for all species, several computational PPI prediction methods have been …
Mercury Uptake by Desulfovibrio desulfuricans ND132: Passive or Active?
Recent studies have identified HgcAB proteins as being responsible for mercury [Hg (II)]
methylation by certain anaerobic microorganisms. However, it remains controversial …
methylation by certain anaerobic microorganisms. However, it remains controversial …
His-tagged peptidiscs enable affinity purification of the membrane proteome for downstream mass spectrometry analysis
Characterization of the integral membrane proteome by mass spectrometry (MS) remains
challenging due its high complexity and inherent insolubility. In a typical experiment, the …
challenging due its high complexity and inherent insolubility. In a typical experiment, the …
A Germin-like protein GLP1 of legumes mediates symbiotic nodulation by interacting with an outer membrane protein of rhizobia
X Zeng, D Li, Y Lv, Y Lu, L Mei, D Zhou… - Microbiology …, 2023 - Am Soc Microbiol
Rhizobia can infect legumes and induce the coordinated expression of symbiosis and
defense genes for the establishment of mutualistic symbiosis. Numerous studies have …
defense genes for the establishment of mutualistic symbiosis. Numerous studies have …
Discovery and identification of genes involved in DNA damage repair in yeast
SK Jagadeesan, T Potter, M Al-Gafari, M Hooshyar… - Gene, 2022 - Elsevier
DNA repair defects are common in tumour cells and can lead to misrepair of double-strand
breaks (DSBs), posing a significant challenge to cellular integrity. The overall mechanisms …
breaks (DSBs), posing a significant challenge to cellular integrity. The overall mechanisms …
YibN, a bona fide interactor of YidC with implications in membrane protein insertion and membrane lipid production
YidC, a prominent member of the Oxa1 superfamily, is essential for the biogenesis of the
bacterial inner membrane, significantly influencing its protein composition and lipid …
bacterial inner membrane, significantly influencing its protein composition and lipid …
Establishment of a protein concentration gradient in the outer membrane requires two diffusion-limiting mechanisms
LD Ginez, A Osorio, L Camarena… - Journal of Bacteriology, 2019 - Am Soc Microbiol
OmpA-like proteins are involved in the stabilization of the outer membrane, resistance to
osmotic stress, and pathogenesis. In Caulobacter crescentus, OmpA2 forms a …
osmotic stress, and pathogenesis. In Caulobacter crescentus, OmpA2 forms a …
[LIBRO][B] Genetic interaction landscape of the Escherichia coli transcriptional factor machinery
A Hosseinnia - 2022 - search.proquest.com
Abstract In Bacteria, transcription factors (TFs) consist of sensory ligand-binding and DNA-
binding helix-turn-helix (HTH) domains to respond to the environmental and internal stimuli …
binding helix-turn-helix (HTH) domains to respond to the environmental and internal stimuli …
Structural characterization of ion translocation by the chimeric potassium uptake system KdpFABC
L Hielkema - 2022 - research.rug.nl
We elucidated a unique transport mechanism by a protein complex that can transport
potassium with high affinity and selectivity against a steep gradient. Potassium regulation is …
potassium with high affinity and selectivity against a steep gradient. Potassium regulation is …
[PDF][PDF] Andrew Emili, Ph. D.
A Emili - bu.edu
Dr. Emili is an internationally recognized leader in protein interaction networks and the
development of innovative technologies to systematically characterize protein complexes on …
development of innovative technologies to systematically characterize protein complexes on …