Superoxide dismutase 1 in health and disease: how a frontline antioxidant becomes neurotoxic

BG Trist, JB Hilton, DJ Hare, PJ Crouch… - Angewandte Chemie …, 2021 - Wiley Online Library
Cu/Zn superoxide dismutase (SOD1) is a frontline antioxidant enzyme catalysing superoxide
breakdown and is important for most forms of eukaryotic life. The evolution of aerobic …

[HTML][HTML] Molecular dynamics analysis of superoxide dismutase 1 mutations suggests decoupling between mechanisms underlying ALS onset and progression

M Kalia, M Miotto, D Ness, S Opie-Martin… - Computational and …, 2023 - Elsevier
Mutations in the superoxide dismutase 1 (SOD1) gene are the second most common known
cause of ALS. SOD1 variants express high phenotypic variability and over 200 have been …

[HTML][HTML] Amyotrophic lateral sclerosis disease-related mutations disrupt the dimerization of superoxide dismutase 1-A comparative molecular dynamics simulation …

S Basith, B Manavalan, G Lee - Computers in Biology and Medicine, 2022 - Elsevier
More than 150 genes are involved in amyotrophic lateral sclerosis (ALS), with superoxide
dismutase 1 (SOD1) being one of the most studied. Mutations in SOD1 gene, which encodes …

[HTML][HTML] Development of in silico analysis and molecular dynamics simulation on L67P and D76Y mutants of the human superoxide dismutase 1 (hSOD1) related to …

P Baziyar, B Seyedalipour… - Iranian Journal of …, 2022 - ncbi.nlm.nih.gov
Background: One neurodegenerative disorder that is caused by a mutation in the hSOD1
gene is Amyotrophic lateral sclerosis (ALS). Objectives: The current study was developed in …

[HTML][HTML] Yeast proteins may reversibly aggregate like amphiphilic molecules

P Dasmeh, A Wagner - Journal of Molecular Biology, 2022 - Elsevier
More than a hundred proteins in yeast reversibly aggregate and phase-separate in
response to various stressors, such as nutrient depletion and heat shock. We know little …

Computer analysis of the relation between hydrogen bond stability in SOD1 mutants and the survival time of amyotrophic lateral sclerosis patients

NA Alemasov, VS Timofeev, NV Ivanisenko… - Journal of Molecular …, 2022 - Elsevier
Background and objective Mutations in the SOD1 protein can lead to the death of motor
neurons, which, in turn, causes an incurable disease called amyotrophic lateral sclerosis …

Genomics research at bioinformatics of genome regulation and structure\systems biology (BGRS\SB) conferences in Novosibirsk

YL Orlov, AV Kochetov, G Li, NA Kolchanov - BMC genomics, 2019 - Springer
Wang and coauthors [21] present method for chromosome structure analysis on cooperation
of transcription factors (TF) based on integration of DNA sequences, ChIP-Seq and ChIA …

Critical sites of DNA backbone integrity for damaged base removal by formamidopyrimidine–DNA glycosylase

AV Endutkin, DO Zharkov - Biochemistry, 2019 - ACS Publications
DNA glycosylases, the enzymes that initiate base excision DNA repair, recognize damaged
bases through a series of precisely orchestrated movements. Most glycosylases sharply kink …