Direct methane oxidation by copper-and iron-dependent methane monooxygenases

FJ Tucci, AC Rosenzweig - Chemical reviews, 2024 - ACS Publications
Methane is a potent greenhouse gas that contributes significantly to climate change and is
primarily regulated in Nature by methanotrophic bacteria, which consume methane gas as …

Diversity, ecology and evolution of Archaea

BJ Baker, V De Anda, KW Seitz, N Dombrowski… - Nature …, 2020 - nature.com
Compared to bacteria, our knowledge of archaeal biology is limited. Historically,
microbiologists have mostly relied on culturing and single-gene diversity surveys to …

Multigroup analysis of compositions of microbiomes with covariate adjustments and repeated measures

H Lin, SD Peddada - Nature methods, 2024 - nature.com
Microbiome differential abundance analysis methods for two groups are well-established in
the literature. However, many microbiome studies involve more than two groups, sometimes …

Beyond fossil fuel–driven nitrogen transformations

JG Chen, RM Crooks, LC Seefeldt, KL Bren… - Science, 2018 - science.org
BACKGROUND The invention of the Haber-Bosch (HB) process in the early 1900s to
produce ammonia industrially from nitrogen and hydrogen revolutionized the manufacture of …

Nitrification and beyond: metabolic versatility of ammonia oxidising archaea

CL Wright, LE Lehtovirta-Morley - The ISME Journal, 2023 - academic.oup.com
Ammonia oxidising archaea are among the most abundant living organisms on Earth and
key microbial players in the global nitrogen cycle. They carry out oxidation of ammonia to …

Nitrous oxide production by ammonia oxidizers: physiological diversity, niche differentiation and potential mitigation strategies

JI Prosser, L Hink, C Gubry‐Rangin… - Global change …, 2020 - Wiley Online Library
Oxidation of ammonia to nitrite by bacteria and archaea is responsible for global emissions
of nitrous oxide directly and indirectly through provision of nitrite and, after further oxidation …

Archaea and the origin of eukaryotes

L Eme, A Spang, J Lombard, CW Stairs… - Nature Reviews …, 2017 - nature.com
Woese and Fox's 1977 paper on the discovery of the Archaea triggered a revolution in the
field of evolutionary biology by showing that life was divided into not only prokaryotes and …

Oxygen and nitrogen production by an ammonia-oxidizing archaeon

B Kraft, N Jehmlich, M Larsen, LA Bristow, M Könneke… - Science, 2022 - science.org
Ammonia-oxidizing archaea (AOA) are one of the most abundant groups of microbes in the
world's oceans and are key players in the nitrogen cycle. Their energy metabolism—the …

Nitrification in agricultural soils: impact, actors and mitigation

F Beeckman, H Motte, T Beeckman - Current opinion in Biotechnology, 2018 - Elsevier
Highlights•Nitrification causes nitrogen losses with impact on crop yield and
environment.•Newly discovered microbes can be important for nitrification in agricultural …

[HTML][HTML] Hydroxylamine and the nitrogen cycle: a review

A Soler-Jofra, J Pérez, MCM Van Loosdrecht - Water Research, 2021 - Elsevier
Aerobic ammonium oxidizing bacteria were first isolated more than 100 years ago and
hydroxylamine is known to be an intermediate. The enzymatic steps involving …