Challenges and triumphs in cryo-electron tomography
RK Hylton, MT Swulius - Iscience, 2021 - cell.com
Cryo-electron tomography has stepped fully into the spotlight. Enthusiasm is high.
Fortunately for us, this is an exciting time to be a cryotomographer, but there is still a way to …
Fortunately for us, this is an exciting time to be a cryotomographer, but there is still a way to …
An image processing pipeline for electron cryo‐tomography in RELION‐5
Electron tomography of frozen, hydrated samples allows structure determination of
macromolecular complexes that are embedded in complex environments. Provided that the …
macromolecular complexes that are embedded in complex environments. Provided that the …
Towards full-stack deep learning-empowered data processing pipeline for synchrotron tomography experiments
Z Zhang, C Li, W Wang, Z Dong, G Liu, Y Dong… - The Innovation, 2024 - cell.com
Synchrotron tomography experiments are transitioning into multifunctional, cross-scale, and
dynamic characterizations, enabled by new-generation synchrotron light sources and fast …
dynamic characterizations, enabled by new-generation synchrotron light sources and fast …
Limited view tomographic reconstruction using a cascaded residual dense spatial-channel attention network with projection data fidelity layer
Limited view tomographic reconstruction aims to reconstruct a tomographic image from a
limited number of projection views arising from sparse view or limited angle acquisitions that …
limited number of projection views arising from sparse view or limited angle acquisitions that …
A closer look at few-shot video classification: A new baseline and benchmark
The existing few-shot video classification methods often employ a meta-learning paradigm
by designing customized temporal alignment module for similarity calculation. While …
by designing customized temporal alignment module for similarity calculation. While …
Computational methods for in situ structural studies with cryogenic electron tomography
C Zhao, D Lu, Q Zhao, C Ren, H Zhang… - Frontiers in Cellular …, 2023 - frontiersin.org
Cryo-electron tomography (cryo-ET) plays a critical role in imaging microorganisms in situ in
terms of further analyzing the working mechanisms of viruses and drug exploitation, among …
terms of further analyzing the working mechanisms of viruses and drug exploitation, among …
paghetti Tracer: A Framework for Tracing Semiregular Filamentous Densities in 3D Tomograms
Within cells, cytoskeletal filaments are often arranged into loosely aligned bundles. These
fibrous bundles are dense enough to exhibit a certain regularity and mean direction …
fibrous bundles are dense enough to exhibit a certain regularity and mean direction …
Cryosam: Training-free cryoet tomogram segmentation with foundation models
Abstract Cryogenic Electron Tomography (CryoET) is a useful imaging technology in
structural biology that is hindered by its need for manual annotations, especially in particle …
structural biology that is hindered by its need for manual annotations, especially in particle …
Detecting protein communities in native cell extracts by machine learning: a structural biologist's perspective
Native cell extracts hold great promise for understanding the molecular structure of ordered
biological systems at high resolution. This is because higher-order biomolecular …
biological systems at high resolution. This is because higher-order biomolecular …
TLIR: Two-layer iterative refinement model for limited-angle CT reconstruction
Q Li, T Wang, RR Li, Y Qiang, B Zhang, J Sun… - … Signal Processing and …, 2025 - Elsevier
Limited angle reconstruction is a typical ill-posed problem in computed tomography (CT). In
practical applications, due to the limited scanning angles available for fixed scan targets and …
practical applications, due to the limited scanning angles available for fixed scan targets and …