Artificial intelligence for digital and computational pathology

AH Song, G Jaume, DFK Williamson, MY Lu… - Nature Reviews …, 2023 - nature.com
Advances in digitizing tissue slides and the fast-paced progress in artificial intelligence,
including deep learning, have boosted the field of computational pathology. This field holds …

Quantification of tumor heterogeneity: from data acquisition to metric generation

A Kashyap, MA Rapsomaniki, V Barros… - Trends in …, 2022 - cell.com
Tumors are unique and complex ecosystems, in which heterogeneous cell subpopulations
with variable molecular profiles, aggressiveness, and proliferation potential coexist and …

Scaling vision transformers to gigapixel images via hierarchical self-supervised learning

RJ Chen, C Chen, Y Li, TY Chen… - Proceedings of the …, 2022 - openaccess.thecvf.com
Abstract Vision Transformers (ViTs) and their multi-scale and hierarchical variations have
been successful at capturing image representations but their use has been generally …

Visual language pretrained multiple instance zero-shot transfer for histopathology images

MY Lu, B Chen, A Zhang… - Proceedings of the …, 2023 - openaccess.thecvf.com
Contrastive visual language pretraining has emerged as a powerful method for either
training new language-aware image encoders or augmenting existing pretrained models …

Dynamic graph representation with knowledge-aware attention for histopathology whole slide image analysis

J Li, Y Chen, H Chu, Q Sun, T Guan… - Proceedings of the …, 2024 - openaccess.thecvf.com
Histopathological whole slide images (WSIs) classification has become a foundation task in
medical microscopic imaging processing. Prevailing approaches involve learning WSIs as …

Bracs: A dataset for breast carcinoma subty** in h&e histology images

N Brancati, AM Anniciello, P Pati, D Riccio… - Database, 2022 - academic.oup.com
Breast cancer is the most commonly diagnosed cancer and registers the highest number of
deaths for women. Advances in diagnostic activities combined with large-scale screening …

A general-purpose self-supervised model for computational pathology

RJ Chen, T Ding, MY Lu, DFK Williamson… - ar** is a fundamental computational pathology (CPath) task in learning
objective characterizations of histopathologic biomarkers in anatomic pathology. However …

[PDF][PDF] Gmai-mmbench: A comprehensive multimodal evaluation benchmark towards general medical ai

J Ye, G Wang, Y Li, Z Deng, W Li, T Li… - The Thirty-eight …, 2024 - proceedings.neurips.cc
Abstract Large Vision-Language Models (LVLMs) are capable of handling diverse data
types such as imaging, text, and physiological signals, and can be applied in various fields …

Sparse multi-modal graph transformer with shared-context processing for representation learning of giga-pixel images

R Nakhli, PA Moghadam, H Mi… - Proceedings of the …, 2023 - openaccess.thecvf.com
Processing giga-pixel whole slide histopathology images (WSI) is a computationally
expensive task. Multiple instance learning (MIL) has become the conventional approach to …

Quantifying explainers of graph neural networks in computational pathology

G Jaume, P Pati, B Bozorgtabar… - Proceedings of the …, 2021 - openaccess.thecvf.com
Explainability of deep learning methods is imperative to facilitate their clinical adoption in
digital pathology. However, popular deep learning methods and explainability techniques …