The universal tree of life: an update

P Forterre - Frontiers in microbiology, 2015 - frontiersin.org
Biologists used to draw schematic “universal” trees of life as metaphors illustrating the
history of life. It is indeed a priori possible to construct an organismal tree connecting the …

The mitochondrial epitranscriptome: the roles of RNA modifications in mitochondrial translation and human disease

MT Bohnsack, KE Sloan - Cellular and Molecular Life Sciences, 2018 - Springer
Mitochondrial protein synthesis is essential for the production of components of the oxidative
phosphorylation system. RNA modifications in the mammalian mitochondrial translation …

Matching tRNA modifications in humans to their known and predicted enzymes

V de Crécy-Lagard, P Boccaletto… - Nucleic acids …, 2019 - academic.oup.com
Abstract tRNA are post-transcriptionally modified by chemical modifications that affect all
aspects of tRNA biology. An increasing number of mutations underlying human genetic …

CO2-sensitive tRNA modification associated with human mitochondrial disease

H Lin, K Miyauchi, T Harada, R Okita… - Nature …, 2018 - nature.com
It has been generally thought that tRNA modifications are stable and static, and their
frequencies are rarely regulated. N 6-threonylcarbamoyladenosine (t6A) occurs at position …

Conservation and Diversification of tRNA t6A-Modifying Enzymes across the Three Domains of Life

C Su, M **, W Zhang - International Journal of Molecular Sciences, 2022 - mdpi.com
The universal N 6-threonylcarbamoyladenosine (t6A) modification occurs at position 37 of
tRNAs that decipher codons starting with adenosine. Mechanistically, t6A stabilizes …

Global translational impacts of the loss of the tRNA modification t6A in yeast

PC Thiaville, R Legendre, D Rojas-Benítez… - Microbial …, 2015 - pmc.ncbi.nlm.nih.gov
The universal tRNA modification t6A is found at position 37 of nearly all tRNAs decoding
ANN codons. The absence of t6A37 leads to severe growth defects in baker's yeast …

Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria)

T Cavalier-Smith, EEY Chao - Protoplasma, 2020 - Springer
Palaeontologically, eubacteria are> 3× older than neomura (eukaryotes, archaebacteria).
Cell biology contrasts ancestral eubacterial murein peptidoglycan walls and derived …

Diversity of the biosynthesis pathway for threonylcarbamoyladenosine (t6A), a universal modification of tRNA

PC Thiaville, D Iwata-Reuyl, V de Crécy-Lagard - RNA biology, 2014 - Taylor & Francis
The tRNA modification field has a rich literature covering biochemical analysis going back
more than 40 years, but many of the corresponding genes were only identified in the last …

tRNA N6-adenosine threonylcarbamoyltransferase defect due to KAE1/TCS3 (OSGEP) mutation manifest by neurodegeneration and renal tubulopathy

S Edvardson, L Prunetti, A Arraf, D Haas… - European Journal of …, 2017 - nature.com
Post-transcriptional tRNA modifications are numerous and require a large set of highly
conserved enzymes in humans and other organisms. In yeast, the loss of many …

Essentiality of threonylcarbamoyladenosine (t6A), a universal tRNA modification, in bacteria

PC Thiaville, B El Yacoubi, C Köhrer… - Molecular …, 2015 - Wiley Online Library
Threonylcarbamoyladenosine (t6 A) is a modified nucleoside universally conserved in t RNA
s in all three kingdoms of life. The recently discovered genes for t6 A synthesis, including tsa …