Skyline‐plot methods for estimating demographic history from nucleotide sequences

SYW Ho, B Shapiro - Molecular ecology resources, 2011 - Wiley Online Library
Estimation of demographic history from nucleotide sequences represents an important
component of many studies in molecular ecology. For example, knowledge of a population's …

Comparative phylogeography of African savannah ungulates1

ED Lorenzen, R Heller, HR Siegismund - Molecular ecology, 2012 - Wiley Online Library
The savannah biome of sub‐Saharan Africa harbours the highest diversity of ungulates
(hoofed mammals) on Earth. In this review, we compile population genetic data from 19 …

Late Quaternary dynamics of Arctic biota from ancient environmental genomics

Y Wang, MW Pedersen, IG Alsos, B De Sanctis… - Nature, 2021 - nature.com
During the last glacial–interglacial cycle, Arctic biotas experienced substantial climatic
changes, yet the nature, extent and rate of their responses are not fully understood …

[BOEK][B] Bayesian evolutionary analysis with BEAST

AJ Drummond, RR Bouckaert - 2015 - books.google.com
What are the models used in phylogenetic analysis and what exactly is involved in Bayesian
evolutionary analysis using Markov chain Monte Carlo (MCMC) methods? How can you …

[HTML][HTML] Complete genomes reveal signatures of demographic and genetic declines in the woolly mammoth

E Palkopoulou, S Mallick, P Skoglund, J Enk… - Current Biology, 2015 - cell.com
The processes leading up to species extinctions are typically characterized by prolonged
declines in population size and geographic distribution, followed by a phase in which …

Species-specific responses of Late Quaternary megafauna to climate and humans

ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock… - Nature, 2011 - nature.com
Despite decades of research, the roles of climate and humans in driving the dramatic
extinctions of large-bodied mammals during the Late Quaternary period remain contentious …

Collapse of the mammoth-steppe in central Yukon as revealed by ancient environmental DNA

TJ Murchie, AJ Monteath, ME Mahony, GS Long… - Nature …, 2021 - nature.com
The temporal and spatial coarseness of megafaunal fossil records complicates attempts to to
disentangle the relative impacts of climate change, ecosystem restructuring, and human …

Ancient DNA reveals late survival of mammoth and horse in interior Alaska

J Haile, DG Froese, RDE MacPhee, RG Roberts… - Proceedings of the …, 2009 - pnas.org
Causes of late Quaternary extinctions of large mammals (“megafauna”) continue to be
debated, especially for continental losses, because spatial and temporal patterns of …

Ecological change, range fluctuations and population dynamics during the Pleistocene

M Hofreiter, J Stewart - Current biology, 2009 - cell.com
Apart from the current human-induced climate change, the Holocene is notable for its stable
climate. In contrast, the preceding age, the Pleistocene, was a time of intensive climatic …

Ancient DNA studies: new perspectives on old samples

E Rizzi, M Lari, E Gigli, G De Bellis… - Genetics Selection …, 2012 - Springer
In spite of past controversies, the field of ancient DNA is now a reliable research area due to
recent methodological improvements. A series of recent large-scale studies have revealed …