The human microbiome in evolution

ER Davenport, JG Sanders, SJ Song, KR Amato… - BMC biology, 2017 - Springer
The trillions of microbes living in the gut—the gut microbiota—play an important role in
human biology and disease. While much has been done to explore its diversity, a full …

Primate microbiomes over time: Longitudinal answers to standing questions in microbiome research

JR Björk, M Dasari, L Grieneisen… - American journal of …, 2019 - Wiley Online Library
To date, most insights into the processes sha** vertebrate gut microbiomes have emerged
from studies with cross‐sectional designs. While this approach has been valuable, emerging …

Deblur rapidly resolves single-nucleotide community sequence patterns

A Amir, D McDonald, JA Navas-Molina, E Kopylova… - …, 2017 - journals.asm.org
High-throughput sequencing of 16S ribosomal RNA gene amplicons has facilitated
understanding of complex microbial communities, but the inherent noise in PCR and DNA …

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

KR Amato, JG Sanders, SJ Song, M Nute… - The ISME …, 2019 - academic.oup.com
Over the past decade several studies have reported that the gut microbiomes of mammals
with similar dietary niches exhibit similar compositional and functional traits. However, these …

[HTML][HTML] Impact of gut microbiota structure in heat-stressed broilers

D Shi, L Bai, Q Qu, S Zhou, M Yang, S Guo, Q Li, C Liu - Poultry science, 2019 - Elsevier
Gut microbiota** play important roles in the health and disease status of both humans and
animals. Little is known about whether heat stress changes the composition of the gut …

Gut microbiome-Mediterranean diet interactions in improving host health

R Nagpal, CA Shively, TC Register, S Craft… - …, 2019 - pmc.ncbi.nlm.nih.gov
The gut microbiota plays a fundamental role in host health and disease. Host diet is one of
the most significant modulators of the gut microbial community and its metabolic activities …

Seasonal, spatial, and maternal effects on gut microbiome in wild red squirrels

T Ren, S Boutin, MM Humphries, B Dantzer, JC Gorrell… - Microbiome, 2017 - Springer
Background Our understanding of gut microbiota has been limited primarily to findings from
human and laboratory animals, but what shapes the gut microbiota in nature remains largely …

Host-associated microbiomes are predicted by immune system complexity and climate

DC Woodhams, MC Bletz, CG Becker, HA Bender… - Genome biology, 2020 - Springer
Background Host-associated microbiomes, the microorganisms occurring inside and on host
surfaces, influence evolutionary, immunological, and ecological processes. Interactions …

Genes, geology and germs: gut microbiota across a primate hybrid zone are explained by site soil properties, not host species

LE Grieneisen, MJE Charpentier… - … of the Royal …, 2019 - royalsocietypublishing.org
Gut microbiota in geographically isolated host populations are often distinct. These
differences have been attributed to between-population differences in host behaviours …

Species identity dominates over environment in sha** the microbiota of small mammals

SCL Knowles, RM Eccles, L Baltrūnaitė - Ecology Letters, 2019 - Wiley Online Library
The mammalian gut microbiota is considered pivotal to host fitness, yet the determinants of
community composition remain poorly understood. Laboratory studies show that …