Diseases 2.0: a weekly updated database of disease–gene associations from text mining and data integration

D Grissa, A Junge, TI Oprea, LJ Jensen - Database, 2022 - academic.oup.com
The scientific knowledge about which genes are involved in which diseases grows rapidly,
which makes it difficult to keep up with new publications and genetics datasets. The …

[HTML][HTML] Evaluation of GPT and BERT-based models on identifying proteinprotein interactions in biomedical text

H Rehana, NB Çam, M Basmaci, J Zheng, C Jemiyo… - Ar** countries
each year. Identification of causative pathogens accurately and rapidly plays a key role in …

Biomedical literature mining: graph kernel-based learning for gene–gene interaction extraction

AR Hsieh, CY Tsai - European Journal of Medical Research, 2024 - Springer
The supervised machine learning method is often used for biomedical relationship
extraction. The disadvantage is that it requires much time and money to manually establish …

PHILM2Web: A high-throughput database of macromolecular host–pathogen interactions on the Web

TD Le, PD Nguyen, D Korkin, T Thieu - Database, 2022 - academic.oup.com
During infection, the pathogen's entry into the host organism, breaching the host immune
defense, spread and multiplication are frequently mediated by multiple interactions between …

[HTML][HTML] Decoding information on COVID–19: Ontological approach towards design possible therapeutics

SK Jayachandran, M Anusuyadevi, MM Essa… - Informatics in Medicine …, 2021 - Elsevier
To date, no effective preventive or curative medical interventions exist against COVID-19,
caused by Severe Acute Respiratory Syndrome corona virus 2 (SARS CoV-2). The available …

[HTML][HTML] Scientific Progress and New Research Tools

National Academies of Sciences … - … Brucellosis in the …, 2017 - ncbi.nlm.nih.gov
1.1. Background When Brucella abortus come in contact with mucous membranes in the
alimentary or respiratory tracts of the host, they invade by attaching to host epithelial cells …

[CITATION][C] Ontology-based entity tagging and normalization in the biomedical domain

Zİ Karadeniz Erol - 2019 - … for Graduate Studies in Science and …