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Four principles to establish a universal virus taxonomy
A universal taxonomy of viruses is essential for a comprehensive view of the virus world and
for communicating the complicated evolutionary relationships among viruses. However …
for communicating the complicated evolutionary relationships among viruses. However …
Minimum information about an uncultivated virus genome (MIUViG)
We present an extension of the Minimum Information about any (x) Sequence (MIxS)
standard for reporting sequences of uncultivated virus genomes. Minimum Information about …
standard for reporting sequences of uncultivated virus genomes. Minimum Information about …
Monkeypox virus genomic accordion strategies
S Monzón, S Varona, A Negredo, S Vidal-Freire… - Nature …, 2024 - nature.com
The 2023 monkeypox (mpox) epidemic was caused by a subclade IIb descendant of a
monkeypox virus (MPXV) lineage traced back to Nigeria in 1971. Person-to-person …
monkeypox virus (MPXV) lineage traced back to Nigeria in 1971. Person-to-person …
Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance
Metagenomic next-generation sequencing (mNGS), the shotgun sequencing of RNA and
DNA from clinical samples, has proved useful for broad-spectrum pathogen detection and …
DNA from clinical samples, has proved useful for broad-spectrum pathogen detection and …
[HTML][HTML] Hantaviridae: Current Classification and Future Perspectives
In recent years, negative-sense RNA virus classification and taxon nomenclature have
undergone considerable transformation. In 2016, the new order Bunyavirales was …
undergone considerable transformation. In 2016, the new order Bunyavirales was …
Characterizing phage genomes for therapeutic applications
Multi-drug resistance is increasing at alarming rates. The efficacy of phage therapy, treating
bacterial infections with bacteriophages alone or in combination with traditional antibiotics …
bacterial infections with bacteriophages alone or in combination with traditional antibiotics …
Past, present, and future of arenavirus taxonomy
SR Radoshitzky, Y Bào, MJ Buchmeier, RN Charrel… - 2015 - Springer
Until recently, members of the monogeneric family Arenaviridae (arenaviruses) have been
known to infect only muroid rodents and, in one case, possibly phyllostomid bats. The …
known to infect only muroid rodents and, in one case, possibly phyllostomid bats. The …
Navigating microbiological food safety in the era of whole-genome sequencing
The epidemiological investigation of a foodborne outbreak, including identification of related
cases, source attribution, and development of intervention strategies, relies heavily on the …
cases, source attribution, and development of intervention strategies, relies heavily on the …
A multicomponent animal virus isolated from mosquitoes
RNA viruses exhibit a variety of genome organization strategies, including multicomponent
genomes in which each segment is packaged separately. Although multicomponent …
genomes in which each segment is packaged separately. Although multicomponent …
Contamination issue in viral metagenomics: problems, solutions, and clinical perspectives
H Jurasz, T Pawłowski, K Perlejewski - Frontiers in Microbiology, 2021 - frontiersin.org
We describe the most common internal and external sources and types of contamination
encountered in viral metagenomic studies and discuss their negative impact on sequencing …
encountered in viral metagenomic studies and discuss their negative impact on sequencing …