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Covid-on-the-Web: Knowledge graph and services to advance COVID-19 research
Scientists are harnessing their multi-disciplinary expertise and resources to fight the COVID-
19 pandemic. Aligned with this mindset, the Covid-on-the-Web project aims to allow …
19 pandemic. Aligned with this mindset, the Covid-on-the-Web project aims to allow …
Doc2Hpo: a web application for efficient and accurate HPO concept curation
Abstract We present Doc2Hpo, an interactive web application that enables interactive and
efficient phenotype concept curation from clinical text with automated concept normalization …
efficient phenotype concept curation from clinical text with automated concept normalization …
SIFR annotator: ontology-based semantic annotation of French biomedical text and clinical notes
Background Despite a wide adoption of English in science, a significant amount of
biomedical data are produced in other languages, such as French. Yet a majority of natural …
biomedical data are produced in other languages, such as French. Yet a majority of natural …
[PDF][PDF] Towards Semantic Integration for Explainable Artificial Intelligence in the Biomedical Domain.
C Pesquita - HEALTHINF, 2021 - pdfs.semanticscholar.org
Explainable artificial intelligence typically focuses on data-based explanations, lacking the
semantic context needed to produce human-centric explanations. This is especially relevant …
semantic context needed to produce human-centric explanations. This is especially relevant …
Cimind: A phonetic-based tool for multilingual named entity recognition in biomedical texts
Background Extracting concepts from biomedical texts is a key to support many advanced
applications such as biomedical information retrieval. However, in clinical notes Named …
applications such as biomedical information retrieval. However, in clinical notes Named …
[HTML][HTML] French FastContext: A publicly accessible system for detecting negation, temporality and experiencer in French clinical notes
The context of medical conditions is an important feature to consider when processing
clinical narratives. NegEx and its extension ConText became the most well-known rule …
clinical narratives. NegEx and its extension ConText became the most well-known rule …
Clinical concept recognition: evaluation of existing systems on EHRs
Objective The adoption of electronic health records (EHRs) has produced enormous
amounts of data, creating research opportunities in clinical data sciences. Several concept …
amounts of data, creating research opportunities in clinical data sciences. Several concept …
[HTML][HTML] Relation extraction from DailyMed structured product labels by optimally combining crowd, experts and machines
The effectiveness of machine learning models to provide accurate and consistent results in
drug discovery and clinical decision support is strongly dependent on the quality of the data …
drug discovery and clinical decision support is strongly dependent on the quality of the data …
Mining concepts for a COVID interface terminology for annotation of EHRs
The COVID-19 pandemic has overwhelmed the healthcare services of many countries with
increased number of patients and also with a deluge of medical data. Furthermore, the …
increased number of patients and also with a deluge of medical data. Furthermore, the …
Health record index: Secure access of cloud-stored healthcare data
Healthcare 4.0 demands healthcare data to be shaped into a common standardized and
interoperable format for achieving more efficient data exchange. What is also needed is for …
interoperable format for achieving more efficient data exchange. What is also needed is for …