The impact of retrotransposons on human genome evolution
R Cordaux, MA Batzer - Nature reviews genetics, 2009 - nature.com
Their ability to move within genomes gives transposable elements an intrinsic propensity to
affect genome evolution. Non-long terminal repeat (LTR) retrotransposons—including LINE …
affect genome evolution. Non-long terminal repeat (LTR) retrotransposons—including LINE …
Methylation of endogenous human retroelements in health and disease
WA Schulz, C Steinhoff, AR Florl - DNA Methylation: Development, Genetic …, 2006 - Springer
Retroelements constitute approximately 45% of the human genome. Long interspersed
nuclear element (LINE) autonomous retrotransposons are predominantly represented by …
nuclear element (LINE) autonomous retrotransposons are predominantly represented by …
SVA elements: a hominid-specific retroposon family
SVA is a composite repetitive element named after its main components, SINE, VNTR and
Alu. We have identified 2762 SVA elements from the human genome draft sequence …
Alu. We have identified 2762 SVA elements from the human genome draft sequence …
The evolutionary history of human DNA transposons: evidence for intense activity in the primate lineage
JK Pace, C Feschotte - Genome research, 2007 - genome.cshlp.org
Class 2, or DNA transposons, make up∼ 3% of the human genome, yet the evolutionary
history of these elements has been largely overlooked and remains poorly understood. Here …
history of these elements has been largely overlooked and remains poorly understood. Here …
Estimating the retrotransposition rate of human Alu elements
Mobile elements such as Alu repeats have substantially altered the architecture of the
human genome, and de novo mobile element insertions sometimes cause genetic …
human genome, and de novo mobile element insertions sometimes cause genetic …
Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus
DNA transposons, or class 2 transposable elements, have successfully propagated in a
wide variety of genomes. However, it is widely believed that DNA transposon activity has …
wide variety of genomes. However, it is widely believed that DNA transposon activity has …
Loss of epigenetic silencing in tumors preferentially affects primate-specific retroelements
Close to 50% of the human genome harbors repetitive sequences originally derived from
mobile DNA elements, and in normal cells, this sequence compartment is tightly regulated …
mobile DNA elements, and in normal cells, this sequence compartment is tightly regulated …
LINEs and SINEs of primate evolution
MK Konkel, JA Walker, MA Batzer - … : Issues, News, and …, 2010 - Wiley Online Library
The primate order is a monophyletic group thought to have diverged from the Euarchonta
more than 65 mya. 1 Recent paleontological and molecular evolution studies place the last …
more than 65 mya. 1 Recent paleontological and molecular evolution studies place the last …
Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project
MK Konkel, JA Walker, AB Hotard… - Genome biology and …, 2015 - academic.oup.com
The goal of the 1000 Genomes Consortium is to characterize human genome structural
variation (SV), including forms of copy number variations such as deletions, duplications …
variation (SV), including forms of copy number variations such as deletions, duplications …
Using Alu Elements as Polyadenylation Sites: A Case of Retroposon Exaptation
C Chen, T Ara, D Gautheret - Molecular biology and evolution, 2009 - academic.oup.com
Of the 1.1 million Alu retroposons in the human genome, about 10,000 are inserted in the
3′ untranslated regions (UTR) of protein-coding genes and 1% of these (107 events) are …
3′ untranslated regions (UTR) of protein-coding genes and 1% of these (107 events) are …