Vaccine development using artificial intelligence and machine learning: A review
VS Asediya, PA Anjaria, RA Mathakiya… - International Journal of …, 2024 - Elsevier
The COVID-19 pandemic has underscored the critical importance of effective vaccines, yet
their development is a challenging and demanding process. It requires identifying antigens …
their development is a challenging and demanding process. It requires identifying antigens …
Merizo: a rapid and accurate protein domain segmentation method using invariant point attention
Abstract The AlphaFold Protein Structure Database, containing predictions for over 200
million proteins, has been met with enthusiasm over its potential in enriching structural …
million proteins, has been met with enthusiasm over its potential in enriching structural …
Exploring structural diversity across the protein universe with the Encyclopedia of Domains
The AlphaFold Protein Structure Database (AFDB) contains more than 214 million predicted
protein structures composed of domains, which are independently folding units found in …
protein structures composed of domains, which are independently folding units found in …
Chainsaw: protein domain segmentation with fully convolutional neural networks
Motivation Protein domains are fundamental units of protein structure and play a pivotal role
in understanding folding, function, evolution, and design. The advent of accurate structure …
in understanding folding, function, evolution, and design. The advent of accurate structure …
Improved protein structure prediction with trRosettaX2, AlphaFold2, and optimized MSAs in CASP15
We present the monomer and multimer structure prediction results of our methods in
CASP15. We first designed an elaborate pipeline that leverages complementary sequence …
CASP15. We first designed an elaborate pipeline that leverages complementary sequence …
CATH v4. 4: major expansion of CATH by experimental and predicted structural data
Abstract CATH (https://www. cathdb. info) is a structural classification database that assigns
domains to the structures in the Protein Data Bank (PDB) and AlphaFold Protein Structure …
domains to the structures in the Protein Data Bank (PDB) and AlphaFold Protein Structure …
A genomic analysis reveals the diversity of cellulosome displaying bacteria
Introduction Several species of cellulolytic bacteria display cellulosomes, massive multi-
cellulase containing complexes that degrade lignocellulosic plant biomass (LCB). A greater …
cellulase containing complexes that degrade lignocellulosic plant biomass (LCB). A greater …
Deep learning for the PSIPRED Protein Analysis Workbench
The PSIRED Workbench is a long established and popular bioinformatics web service
offering a wide range of machine learning based analyses for characterizing protein …
offering a wide range of machine learning based analyses for characterizing protein …
Scalable normalizing flows enable Boltzmann generators for macromolecules
The Boltzmann distribution of a protein provides a roadmap to all of its functional states.
Normalizing flows are a promising tool for modeling this distribution, but current methods are …
Normalizing flows are a promising tool for modeling this distribution, but current methods are …
[HTML][HTML] CATH 2024: CATH-AlphaFlow Doubles the Number of Structures in CATH and Reveals Nearly 200 New Folds
Abstract CATH (https://www. cathdb. info) classifies domain structures from experimental
protein structures in the PDB and predicted structures in the AlphaFold Database (AFDB). To …
protein structures in the PDB and predicted structures in the AlphaFold Database (AFDB). To …