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Genome-wide genetic marker discovery and genoty** using next-generation sequencing
The advent of next-generation sequencing (NGS) has revolutionized genomic and
transcriptomic approaches to biology. These new sequencing tools are also valuable for the …
transcriptomic approaches to biology. These new sequencing tools are also valuable for the …
Applications of next-generation sequencing to phylogeography and phylogenetics
This is a time of unprecedented transition in DNA sequencing technologies. Next-generation
sequencing (NGS) clearly holds promise for fast and cost-effective generation of multilocus …
sequencing (NGS) clearly holds promise for fast and cost-effective generation of multilocus …
Stacks: an analysis tool set for population genomics
Massively parallel short‐read sequencing technologies, coupled with powerful software
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genoty** in Model and Non-Model Species
The ability to efficiently and accurately determine genotypes is a keystone technology in
modern genetics, crucial to studies ranging from clinical diagnostics, to genotype-phenotype …
modern genetics, crucial to studies ranging from clinical diagnostics, to genotype-phenotype …
Genome-wide scan for adaptive divergence and association with population-specific covariates
M Gautier - Genetics, 2015 - academic.oup.com
In population genomics studies, accounting for the neutral covariance structure across
population allele frequencies is critical to improve the robustness of genome-wide scan …
population allele frequencies is critical to improve the robustness of genome-wide scan …
[KSIĄŻKA][B] Ecological speciation
P Nosil - 2012 - books.google.com
The origin of biological diversity, via the formation of new species, can be inextricably linked
to adaptation to the ecological environment. Specifically, ecological processes are central to …
to adaptation to the ecological environment. Specifically, ecological processes are central to …
PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs
HEL Lischer, L Excoffier - Bioinformatics, 2012 - academic.oup.com
The analysis of genetic data often requires a combination of several approaches using
different and sometimes incompatible programs. In order to facilitate data exchange and file …
different and sometimes incompatible programs. In order to facilitate data exchange and file …
RAD seq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
Reduced representation genome‐sequencing approaches based on restriction digestion
are enabling large‐scale marker generation and facilitating genomic studies in a wide range …
are enabling large‐scale marker generation and facilitating genomic studies in a wide range …
Genome‐wide association genetics of an adaptive trait in lodgepole pine
Pine cones that remain closed and retain seeds until fire causes the cones to open (cone
serotiny) represent a key adaptive trait in a variety of pine species. In lodgepole pine, there …
serotiny) represent a key adaptive trait in a variety of pine species. In lodgepole pine, there …
Of glaciers and refugia: a decade of study sheds new light on the phylogeography of northwestern North America
Glacial cycles have played a dominant role in sha** the genetic structure and distribution
of biota in northwestern North America. The two major ice age refugia of Beringia and the …
of biota in northwestern North America. The two major ice age refugia of Beringia and the …