[HTML][HTML] How genomics can help biodiversity conservation

K Theissinger, C Fernandes, G Formenti, I Bista… - Trends in genetics, 2023 - cell.com
The availability of public genomic resources can greatly assist biodiversity assessment,
conservation, and restoration efforts by providing evidence for scientifically informed …

Towards population-scale long-read sequencing

W De Coster, MH Weissensteiner… - Nature Reviews …, 2021 - nature.com
Long-read sequencing technologies have now reached a level of accuracy and yield that
allows their application to variant detection at a scale of tens to thousands of samples …

Sequence locally, think globally: the Darwin Tree of Life Project

Darwin Tree of Life Project Consortium - Proceedings of the National …, 2022 - pnas.org
The goals of the Earth Biogenome Project—to sequence the genomes of all eukaryotic life
on earth—are as daunting as they are ambitious. The Darwin Tree of Life Project was …

The earth BioGenome project 2020: Starting the clock

HA Lewin, S Richards, E Lieberman Aiden… - Proceedings of the …, 2022 - pnas.org
November 2020 marked 2 y since the launch of the Earth BioGenome Project (EBP), which
aims to sequence all known eukaryotic species in a 10-y timeframe. Since then, significant …

Identifying and removing haplotypic duplication in primary genome assemblies

D Guan, SA McCarthy, J Wood, K Howe, Y Wang… - …, 2020 - academic.oup.com
Motivation Rapid development in long-read sequencing and scaffolding technologies is
accelerating the production of reference-quality assemblies for large eukaryotic genomes …

Modern epigenetics methods in biological research

Y Li - Methods, 2021 - Elsevier
The definition of epigenetics refers that molecular modifications on DNA that can regulate
gene activity are independent of DNA sequence and mitotically stable. Notably, epigenetics …

Advances and opportunities in malaria population genomics

DE Neafsey, AR Taylor, BL MacInnis - Nature Reviews Genetics, 2021 - nature.com
Almost 20 years have passed since the first reference genome assemblies were published
for Plasmodium falciparum, the deadliest malaria parasite, and Anopheles gambiae, the …

Single-fly genome assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life

BY Kim, HR Gellert, SH Church, A Suvorov… - PLoS …, 2024 - journals.plos.org
Long-read sequencing is driving rapid progress in genome assembly across all major
groups of life, including species of the family Drosophilidae, a longtime model system for …

Latest techniques to study DNA methylation

Q Gouil, A Keniry - Essays in biochemistry, 2019 - portlandpress.com
Bisulfite sequencing is a powerful technique to detect 5-methylcytosine in DNA that has
immensely contributed to our understanding of epigenetic regulation in plants and animals …

Why sequence all eukaryotes?

M Blaxter, JM Archibald, AK Childers… - Proceedings of the …, 2022 - pnas.org
Life on Earth has evolved from initial simplicity to the astounding complexity we experience
today. Bacteria and archaea have largely excelled in metabolic diversification, but …