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Enhancer redundancy in development and disease
Shadow enhancers are seemingly redundant transcriptional cis-regulatory elements that
regulate the same gene and drive overlap** expression patterns. Recent studies have …
regulate the same gene and drive overlap** expression patterns. Recent studies have …
What are super-enhancers?
The term'super-enhancer'has been used to describe groups of putative enhancers in close
genomic proximity with unusually high levels of Mediator binding, as measured by chromatin …
genomic proximity with unusually high levels of Mediator binding, as measured by chromatin …
[HTML][HTML] Super-enhancers include classical enhancers and facilitators to fully activate gene expression
JW Blayney, H Francis, A Rampasekova, B Camellato… - Cell, 2023 - cell.com
Super-enhancers are compound regulatory elements that control expression of key cell
identity genes. They recruit high levels of tissue-specific transcription factors and co …
identity genes. They recruit high levels of tissue-specific transcription factors and co …
Gene therapy in patients with transfusion-dependent β-thalassemia
AA Thompson, MC Walters, J Kwiatkowski… - … England Journal of …, 2018 - Mass Medical Soc
Background Donor availability and transplantation-related risks limit the broad use of
allogeneic hematopoietic-cell transplantation in patients with transfusion-dependent β …
allogeneic hematopoietic-cell transplantation in patients with transfusion-dependent β …
H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions
The mechanisms underlying gene repression and silencers are poorly understood. Here we
investigate the hypothesis that H3K27me3-rich regions of the genome, defined from clusters …
investigate the hypothesis that H3K27me3-rich regions of the genome, defined from clusters …
[HTML][HTML] Super-enhancers in the control of cell identity and disease
Super-enhancers are large clusters of transcriptional enhancers that drive expression of
genes that define cell identity. Improved understanding of the roles that super-enhancers …
genes that define cell identity. Improved understanding of the roles that super-enhancers …
[HTML][HTML] Master transcription factors and mediator establish super-enhancers at key cell identity genes
Summary Master transcription factors Oct4, Sox2, and Nanog bind enhancer elements and
recruit Mediator to activate much of the gene expression program of pluripotent embryonic …
recruit Mediator to activate much of the gene expression program of pluripotent embryonic …
Three-dimensional genome architecture: players and mechanisms
A Pombo, N Dillon - Nature reviews Molecular cell biology, 2015 - nature.com
The different cell types of an organism share the same DNA, but during cell differentiation
their genomes undergo diverse structural and organizational changes that affect gene …
their genomes undergo diverse structural and organizational changes that affect gene …
Building regulatory landscapes reveals that an enhancer can recruit cohesin to create contact domains, engage CTCF sites and activate distant genes
NJ Rinzema, K Sofiadis, SJD Tjalsma… - Nature Structural & …, 2022 - nature.com
Developmental gene expression is often controlled by distal regulatory DNA elements called
enhancers. Distant enhancer action is restricted to structural chromosomal domains that are …
enhancers. Distant enhancer action is restricted to structural chromosomal domains that are …
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra… - Nature, 2012 - nature.com
DNase I hypersensitive sites (DHSs) are markers of regulatory DNA and have underpinned
the discovery of all classes of cis-regulatory elements including enhancers, promoters …
the discovery of all classes of cis-regulatory elements including enhancers, promoters …