Comparative muscle transcriptome associated with carcass traits of Nellore cattle

B Silva-Vignato, LL Coutinho, ASM Cesar, MD Poleti… - BMC genomics, 2017 - Springer
Background Commercial cuts yield is an important trait for beef production, which affects the
final value of the products, but its direct determination is a challenging procedure to be …

Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle

B Silva-Vignato, LL Coutinho, MD Poleti, ASM Cesar… - BMC genomics, 2019 - Springer
Background Positively correlated with carcass weight and animal growth, the ribeye area
(REA) and the backfat thickness (BFT) are economic important carcass traits, which impact …

Multi-trait Bayesian analysis and genetic parameter estimates in production characters of Mecheri sheep of India

TA Kannan, M Jaganathan, R Ramanujam… - Tropical Animal Health …, 2023 - Springer
The present study was carried out to estimate the genetic parameters for direct and maternal
influences on Mecheri sheep (Ovis aries) growth traits using Bayesian multi-trait animal …

Deriving gene networks from SNP associated with triacylglycerol and phospholipid fatty acid fractions from Ribeyes of Angus cattle

JW Buchanan, JM Reecy, DJ Garrick, Q Duan… - Frontiers in …, 2016 - frontiersin.org
The fatty acid profile of beef is a complex trait that can benefit from gene-interaction network
analysis to understand relationships among loci that contribute to phenotypic variation …

Comprehensive maternal characteristics associated with birth weight: Bayesian modeling in a prospective cohort study from Iran

M Mansourian, R Mohammadi… - Journal of Research …, 2017 - journals.lww.com
Background: In this study, we aimed to determine comprehensive maternal characteristics
associated with birth weight using Bayesian modeling. Materials and Methods: A total of 526 …

Use of robust multivariate linear mixed models for estimation of genetic parameters for carcass traits in beef cattle

SO Peters, K Kizilkaya, DJ Garrick… - Journal of Animal …, 2014 - Wiley Online Library
Assumptions of normality of residuals for carcass evaluation may make inferences
vulnerable to the presence of outliers, but heavy‐tail densities are viable alternatives to …

On Estimation and Prediction in Linear Mixed Models: A new approach to studying equal BLUEs and BLUPs

A Chizarifard - 2024 - diva-portal.org
Linear mixed models (LMMs) are widely used to analyze repeated, longitudinal, or clustered
data in many disciplines, such as biology, medicine, psychology, sociology, economics, etc …

Application of multivariate heavy-tailed distributions to residuals in the estimation of genetic parameters of growth traits in beef cattle

SO Peters, K Kizilkaya, DJ Garrick… - Journal of Animal …, 2013 - academic.oup.com
Assumptions of normality in most animal breeding applications may make inferences
vulnerable to the presence of outliers. Heavy-tail densities are viable alternatives to normal …

Nonparametric Estimation in Linear Mixed Models with Uncorrelated Homoscedastic Errors

EPN Nguéma, BF Nono, H Gwét - Open Journal of Statistics, 2021 - scirp.org
Today, Linear Mixed Models (LMMs) are fitted, mostly, by assuming that random effects and
errors have Gaussian distributions, therefore using Maximum Likelihood (ML) or REML …

Multi-trait bayesian analysis and genetic parameter estimates in production characters of Mecheri sheep of India

AK Thiruvenkadan, M Jaganathan, R Ramanujam… - 2022 - researchsquare.com
The present study was conducted to calculate the genetic parameters for direct and maternal
influences on Mecheri sheep growth features by Bayesian analysis using multi-trait animal …