[HTML][HTML] Efficacy of adoptive therapy with tumor-infiltrating lymphocytes and recombinant interleukin-2 in advanced cutaneous melanoma: a systematic review and …

U Dafni, O Michielin, SM Lluesma, Z Tsourti… - Annals of …, 2019 - Elsevier
Adoptive cell therapy (ACT) using autologous tumor-infiltrating lymphocytes (TIL) has been
tested in advanced melanoma patients at various centers. We conducted a systematic …

Agent-based methods facilitate integrative science in cancer

J West, M Robertson-Tessi, ARA Anderson - Trends in cell biology, 2023 - cell.com
In this opinion, we highlight agent-based modeling as a key tool for exploration of cell–cell
and cell–environment interactions that drive cancer progression, therapeutic resistance, and …

The genomic landscape of 2,023 colorectal cancers

AJ Cornish, AJ Gruber, B Kinnersley, D Chubb… - Nature, 2024 - nature.com
Colorectal carcinoma (CRC) is a common cause of mortality, but a comprehensive
description of its genomic landscape is lacking,,,,,,–. Here we perform whole-genome …

Network-based machine learning approach to predict immunotherapy response in cancer patients

JH Kong, D Ha, J Lee, I Kim, M Park, SH Im… - Nature …, 2022 - nature.com
Immune checkpoint inhibitors (ICIs) have substantially improved the survival of cancer
patients over the past several years. However, only a minority of patients respond to ICI …

Phenotypic plasticity and genetic control in colorectal cancer evolution

J Househam, T Heide, GD Cresswell, I Spiteri… - Nature, 2022 - nature.com
Genetic and epigenetic variation, together with transcriptional plasticity, contribute to
intratumour heterogeneity. The interplay of these biological processes and their respective …

[HTML][HTML] Homopolymer switches mediate adaptive mutability in mismatch repair-deficient colorectal cancer

H Kayhanian, W Cross, SEM van der Horst… - Nature Genetics, 2024 - nature.com
Mismatch repair (MMR)-deficient cancer evolves through the stepwise erosion of coding
homopolymers in target genes. Curiously, the MMR genes MutS homolog 6 (MSH6) and …

Comprehensive profiling of 1015 patients' exomes reveals genomic-clinical associations in colorectal cancer

Q Zhao, F Wang, YX Chen, S Chen, YC Yao… - Nature …, 2022 - nature.com
The genetic basis of colorectal cancer (CRC) and its clinical associations remain poorly
understood due to limited samples or targeted genes in current studies. Here, we perform …

Genetic immune escape landscape in primary and metastatic cancer

F Martínez-Jiménez, P Priestley, C Shale, J Baber… - Nature Genetics, 2023 - nature.com
Studies have characterized the immune escape landscape across primary tumors. However,
whether late-stage metastatic tumors present differences in genetic immune escape (GIE) …

Steering and controlling evolution—from bioengineering to fighting pathogens

M Lässig, V Mustonen, A Nourmohammad - Nature Reviews Genetics, 2023 - nature.com
Control interventions steer the evolution of molecules, viruses, microorganisms or other cells
towards a desired outcome. Applications range from engineering biomolecules and …

HLA class I loss in colorectal cancer: implications for immune escape and immunotherapy

P Anderson, N Aptsiauri, F Ruiz-Cabello… - Cellular & molecular …, 2021 - nature.com
T cell-mediated immune therapies have emerged as a promising treatment modality in
different malignancies including colorectal cancer (CRC). However, only a fraction of …