[HTML][HTML] The CRISPR-Cas toolbox and gene editing technologies

G Liu, Q Lin, S **, C Gao - Molecular cell, 2022 - cell.com
The emergence of CRISPR-Cas systems has accelerated the development of gene editing
technologies, which are widely used in the life sciences. To improve the performance of …

Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors

AV Anzalone, LW Koblan, DR Liu - Nature biotechnology, 2020 - nature.com
The development of new CRISPR–Cas genome editing tools continues to drive major
advances in the life sciences. Four classes of CRISPR–Cas-derived genome editing agents …

Base editing: precision chemistry on the genome and transcriptome of living cells

HA Rees, DR Liu - Nature reviews genetics, 2018 - nature.com
RNA-guided programmable nucleases from CRISPR systems generate precise breaks in
DNA or RNA at specified positions. In cells, this activity can lead to changes in DNA …

Multiplexed CRISPR technologies for gene editing and transcriptional regulation

NS McCarty, AE Graham, L Studená… - Nature …, 2020 - nature.com
Multiplexed CRISPR technologies, in which numerous gRNAs or Cas enzymes are
expressed at once, have facilitated powerful biological engineering applications, vastly …

A time-resolved, multi-symbol molecular recorder via sequential genome editing

J Choi, W Chen, A Minkina, FM Chardon, CC Suiter… - Nature, 2022 - nature.com
DNA is naturally well suited to serve as a digital medium for in vivo molecular recording.
However, contemporary DNA-based memory devices are constrained in terms of the …

Hydrogel-based biocontainment of bacteria for continuous sensing and computation

TC Tang, E Tham, X Liu, K Yehl, AJ Rovner… - Nature Chemical …, 2021 - nature.com
Genetically modified microorganisms (GMMs) can enable a wide range of important
applications including environmental sensing and responsive engineered living materials …

Biomarker-responsive engineered probiotic diagnoses, records, and ameliorates inflammatory bowel disease in mice

ZP Zou, Y Du, TT Fang, Y Zhou, BC Ye - Cell Host & Microbe, 2023 - cell.com
Rapid advances in synthetic biology have fueled interest in engineered microorganisms that
can diagnose and treat disease. However, designing bacteria that detect dynamic disease …

CRISPR/Cas-mediated base editing: technical considerations and practical applications

KA Molla, Y Yang - Trends in biotechnology, 2019 - cell.com
Genome editing with CRISPR/Cas has rapidly gained popularity. Base editing, a new
CRISPR/Cas-based approach, can precisely convert one nucleotide to another in DNA or …

Precision genome editing using cytosine and adenine base editors in mammalian cells

TP Huang, GA Newby, DR Liu - Nature protocols, 2021 - nature.com
Genome editing has transformed the life sciences and has exciting prospects for use in
treating genetic diseases. Our laboratory developed base editing to enable precise and …

Symbolic recording of signalling and cis-regulatory element activity to DNA

W Chen, J Choi, X Li, JF Nathans, B Martin, W Yang… - Nature, 2024 - nature.com
Measurements of gene expression or signal transduction activity are conventionally
performed using methods that require either the destruction or live imaging of a biological …