Computational and analytical challenges in single-cell transcriptomics

O Stegle, SA Teichmann, JC Marioni - Nature Reviews Genetics, 2015 - nature.com
The development of high-throughput RNA sequencing (RNA-seq) at the single-cell level has
already led to profound new discoveries in biology, ranging from the identification of novel …

Lineage specification in the mouse preimplantation embryo

C Chazaud, Y Yamanaka - Development, 2016 - journals.biologists.com
During mouse preimplantation embryo development, totipotent blastomeres generate the
first three cell lineages of the embryo: trophectoderm, epiblast and primitive endoderm. In …

Principles of self-organization of the mammalian embryo

M Zhu, M Zernicka-Goetz - Cell, 2020 - cell.com
Early embryogenesis is a conserved and self-organized process. In the mammalian embryo,
the potential for self-organization is manifested in its extraordinary developmental plasticity …

Keratins are asymmetrically inherited fate determinants in the mammalian embryo

HYG Lim, YD Alvarez, M Gasnier, Y Wang, P Tetlak… - Nature, 2020 - nature.com
To implant in the uterus, the mammalian embryo first specifies two cell lineages: the
pluripotent inner cell mass that forms the fetus, and the outer trophectoderm layer that forms …

Principles and mechanisms of asymmetric cell division

B Sunchu, C Cabernard - Development, 2020 - journals.biologists.com
Asymmetric cell division (ACD) is an evolutionarily conserved mechanism used by
prokaryotes and eukaryotes alike to control cell fate and generate cell diversity. A detailed …

Cytoskeletal control of early mammalian development

HYG Lim, N Plachta - Nature Reviews Molecular Cell Biology, 2021 - nature.com
The cytoskeleton—comprising actin filaments, microtubules and intermediate filaments—
serves instructive roles in regulating cell function and behaviour during development …

Totipotency: what it is and what it is not

ML Condic - Stem cells and development, 2014 - liebertpub.com
There is surprising confusion surrounding the concept of biological totipotency, both within
the scientific community and in society at large. Increasingly, ethical objections to scientific …

[HTML][HTML] Apicobasal RNA asymmetries regulate cell fate in the early mouse embryo

A Hawdon, ND Geoghegan, M Mohenska… - Nature …, 2023 - nature.com
The spatial sorting of RNA transcripts is fundamental for the refinement of gene expression
to distinct subcellular regions. Although, in non-mammalian early embryogenesis …

Angiomotin prevents pluripotent lineage differentiation in mouse embryos via Hippo pathway-dependent and-independent mechanisms

CY Leung, M Zernicka-Goetz - Nature communications, 2013 - nature.com
Cell identity is specified in the early mammalian embryo by the generation of precursors for
two cell lineages: the pluripotent inner cell mass and differentiating trophectoderm. Here we …

Developmental plasticity, cell fate specification and morphogenesis in the early mouse embryo

I Bedzhov, SJL Graham, CY Leung… - … Transactions of the …, 2014 - royalsocietypublishing.org
A critical point in mammalian development is when the early embryo implants into its
mother's uterus. This event has historically been difficult to study due to the fact that it occurs …