Cross-feeding in the gut microbiome: ecology and mechanisms

EJ Culp, AL Goodman - Cell Host & Microbe, 2023 - cell.com
Microbial communities are shaped by positive and negative interactions ranging from
competition to mutualism. In the context of the mammalian gut and its microbial inhabitants …

Intestinal mucus and their glycans: A habitat for thriving microbiota

AS Luis, GC Hansson - Cell Host & Microbe, 2023 - cell.com
The colon mucus layer is organized with an inner colon mucus layer that is impenetrable to
bacteria and an outer mucus layer that is expanded to allow microbiota colonization. A major …

Carbohydrate-active enzymes (CAZymes) in the gut microbiome

JF Wardman, RK Bains, P Rahfeld… - Nature Reviews …, 2022 - nature.com
The 1013–1014 microorganisms present in the human gut (collectively known as the human
gut microbiota) dedicate substantial percentages of their genomes to the degradation and …

[HTML][HTML] Bacteroides utilization for dietary polysaccharides and their beneficial effects on gut health

J Cheng, J Hu, F Geng, S Nie - Food Science and Human Wellness, 2022 - Elsevier
Polysaccharide was a class of macromolecular substance with various bioactive functions.
Gut symbiotic microorganisms could utilize the polysaccharides from various sources, thus …

[PDF][PDF] Polysaccharide degradation by the Bacteroidetes: mechanisms and nomenclature

LS McKee, SL La Rosa, B Westereng… - Environmental …, 2021 - Wiley Online Library
The Bacteroidetes phylum is renowned for its ability to degrade a wide range of complex
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …

Introduction to the human gut microbiota

E Thursby, N Juge - Biochemical journal, 2017 - portlandpress.com
The human gastrointestinal (GI) tract harbours a complex and dynamic population of
microorganisms, the gut microbiota, which exert a marked influence on the host during …

dbCAN2: a meta server for automated carbohydrate-active enzyme annotation

H Zhang, T Yohe, L Huang, S Entwistle… - Nucleic acids …, 2018 - academic.oup.com
Complex carbohydrates of plants are the main food sources of animals and microbes, and
serve as promising renewable feedstock for biofuel and biomaterial production …

Nondigestible carbohydrates, butyrate, and butyrate-producing bacteria

X Fu, Z Liu, C Zhu, H Mou, Q Kong - Critical reviews in food science …, 2019 - Taylor & Francis
Nondigestible carbohydrates (NDCs) are fermentation substrates in the colon after esca**
digestion in the upper gastrointestinal tract. Among NDCs, resistant starch is not hydrolyzed …

Bacteroidetes use thousands of enzyme combinations to break down glycans

P Lapébie, V Lombard, E Drula, N Terrapon… - Nature …, 2019 - nature.com
Unlike proteins, glycan chains are not directly encoded by DNA, but by the specificity of the
enzymes that assemble them. Theoretical calculations have proposed an astronomical …