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Metabolic pathways engineering for drought or/and heat tolerance in cereals
S Liu, T Zenda, Z Tian, Z Huang - Frontiers in Plant Science, 2023 - frontiersin.org
Drought (D) and heat (H) are the two major abiotic stresses hindering cereal crop growth
and productivity, either singly or in combination (D/+ H), by imposing various negative …
and productivity, either singly or in combination (D/+ H), by imposing various negative …
[HTML][HTML] Progress in plant genome sequencing
RJ Henry - Applied Biosciences, 2022 - mdpi.com
The genome sequence of any organism is key to understanding the biology and utility of that
organism. Plants have diverse, complex and sometimes very large nuclear genomes …
organism. Plants have diverse, complex and sometimes very large nuclear genomes …
Pan-genome and phylogenomic analyses highlight Hevea species delineation and rubber trait evolution
Y Fang, X **ao, J Lin, Q Lin, J Wang, K Liu, Z Li… - Nature …, 2024 - nature.com
The para rubber tree (Hevea brasiliensis) is the world's sole commercial source of natural
rubber, a vital industrial raw material. However, the narrow genetic diversity of this crop …
rubber, a vital industrial raw material. However, the narrow genetic diversity of this crop …
Two long read-based genome assembly and annotation of polyploidy woody plants, Hibiscus syriacus L. using PacBio and Nanopore platforms
Improvements in long read DNA sequencing and related techniques facilitated the
generation of complex eukaryotic genomes. Despite these advances, the quality of …
generation of complex eukaryotic genomes. Despite these advances, the quality of …
An improved Nicotiana benthamiana bioproduction chassis provides novel insights into nicotine biosynthesis
The model plant Nicotiana benthamiana is an increasingly attractive organism for the
production of high‐value, biologically active molecules. However, N. benthamiana …
production of high‐value, biologically active molecules. However, N. benthamiana …
Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes
Premise Robust standards to evaluate quality and completeness are lacking in eukaryotic
structural genome annotation, as genome annotation software is developed using model …
structural genome annotation, as genome annotation software is developed using model …
Highly accurate long reads are crucial for realizing the potential of biodiversity genomics
Background Generating the most contiguous, accurate genome assemblies given available
sequencing technologies is a long-standing challenge in genome science. With the rise of …
sequencing technologies is a long-standing challenge in genome science. With the rise of …
Chromosome-scale genome assembly and annotation of Paspalum notatum Flüggé var. saurae
Paspalum notatum Flüggé is an economically important subtropical fodder grass that is
widely used in the Americas. Here, we report a new chromosome-scale genome assembly …
widely used in the Americas. Here, we report a new chromosome-scale genome assembly …
[HTML][HTML] Using the next-generation sequencing approach for the discovery and characterization of molecular plant markers
Crop development is critical to meeting the world's growing food needs, especially in light of
the challenges posed by climate change and population growth. Molecular markers (MM) …
the challenges posed by climate change and population growth. Molecular markers (MM) …
Balancing read length and sequencing depth: Optimizing Nanopore long‐read sequencing for monocots with an emphasis on the Liliales
GY De La Cerda, JB Landis, E Eifler… - Applications in Plant …, 2023 - Wiley Online Library
Premise We present approaches used to generate long‐read Nanopore sequencing reads
for the Liliales and demonstrate how modifications to standard protocols directly impact read …
for the Liliales and demonstrate how modifications to standard protocols directly impact read …