Upscaling biodiversity monitoring: Metabarcoding estimates 31,846 insect species from Malaise traps across Germany

D Buchner, JS Sinclair, M Ayasse… - Molecular Ecology …, 2025 - Wiley Online Library
Mitigating ongoing losses of insects and their key functions (eg pollination) requires tracking
large‐scale and long‐term community changes. However, doing so has been hindered by …

Assessing the response of an urban stream ecosystem to salinization under different flow regimes

IM Pimentel, D Baikova, D Buchner… - Science of The Total …, 2024 - Elsevier
Urban streams are exposed to a variety of anthropogenic stressors. Freshwater salinization
is a key stressor in these ecosystems that is predicted to be further exacerbated by climate …

Functional and compositional responses of stream microphytobenthic communities to multiple stressors increase and release in a mesocosm experiment

NAS Mayombo, AM Burfeid-Castellanos… - Science of The Total …, 2024 - Elsevier
Field observations form the basis of the majority of studies on microphytobenthic algal
communities in freshwater ecosystems. Controlled mesocosm experiments data are …

[PDF][PDF] Homogenization of insect bulk samples yields more comprehensive yet comparable biodiversity data than non-destructive lysis

L Wolany, J Enss, F Leese… - Metabarcoding and …, 2024 - mbmg.pensoft.net
The rapid advancement of molecular biodiversity monitoring tools, particularly DNA
metabarcoding, has improved specimen identification in bulk samples, such as those from …

Upscaling biodiversity monitoring: Metabarcoding estimates 31,846 insect species from Malaise traps across Germany

D Buchner, JS Sinclair, M Ayasse, A Beermann, J Buse… - bioRxiv, 2023 - biorxiv.org
Insects are unique in terms of their high species diversity and deliver key ecological
functions. Despite this importance, we know little about true species numbers and …

[HTML][HTML] Is it worth the extra mile? Comparing environmental DNA and RNA metabarcoding for vertebrate and invertebrate biodiversity surveys in a lowland stream

TH Macher, J Arle, AJ Beermann, L Frank, K Hupało… - PeerJ, 2024 - peerj.com
Environmental DNA (eDNA) metabarcoding has emerged as a promising approach to
assess biodiversity and derive ecological status classes from water samples. However, a …

Complex compositional and cellular response of river sediment microbiomes to multiple anthropogenic stressors

TL Stach, A Deep, I Madge Pimentel, D Buchner… - bioRxiv, 2024 - biorxiv.org
Rivers face constant anthropogenic stressors, resulting in significant changes in microbial
community composition. What remains unclear is whether these changes render the …

Effects of temperature and salinity on microbial degradation of bacterial necromass in urban river sediments in outdoor mesocosm experiments

U Hadžiomerović, D Baikova, I Madge Pimentel… - bioRxiv, 2024 - biorxiv.org
Microorganisms play a key role in the functioning of healthy river ecosystems because they
consume carbon and nutrients from dead biomass derived from algae and other higher …