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Metabolic and biogeochemical consequences of viral infection in aquatic ecosystems
AE Zimmerman, C Howard-Varona… - Nature Reviews …, 2020 - nature.com
Ecosystems are controlled by 'bottom-up'(resources) and 'top-down'(predation) forces. Viral
infection is now recognized as a ubiquitous top-down control of microbial growth across …
infection is now recognized as a ubiquitous top-down control of microbial growth across …
The human gut phageome: origins and roles in the human gut microbiome
The investigation of the microbial populations of the human body, known as the microbiome,
has led to a revolutionary field of science, and understanding of its impacts on human …
has led to a revolutionary field of science, and understanding of its impacts on human …
Potential auxiliary metabolic capabilities and activities reveal biochemical impacts of viruses in municipal wastewater treatment plants
Viruses influence biogeochemical cycles in oceans, freshwater, soil, and human gut through
infection and by modulating virocell metabolism through virus-encoded auxiliary metabolic …
infection and by modulating virocell metabolism through virus-encoded auxiliary metabolic …
The OceanDNA MAG catalog contains over 50,000 prokaryotic genomes originated from various marine environments
Marine microorganisms are immensely diverse and play fundamental roles in global
geochemical cycling. Recent metagenome-assembled genome studies, with particular …
geochemical cycling. Recent metagenome-assembled genome studies, with particular …
Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations
Background Peatlands are expected to experience sustained yet fluctuating higher
temperatures due to climate change, leading to increased microbial activity and greenhouse …
temperatures due to climate change, leading to increased microbial activity and greenhouse …
Moisture modulates soil reservoirs of active DNA and RNA viruses
Soil is known to harbor viruses, but the majority are uncharacterized and their responses to
environmental changes are unknown. Here, we used a multi-omics approach …
environmental changes are unknown. Here, we used a multi-omics approach …
[HTML][HTML] Coming-of-age characterization of soil viruses: a user's guide to virus isolation, detection within metagenomes, and viromics
The study of soil viruses, though not new, has languished relative to the study of marine
viruses. This is particularly due to challenges associated with separating virions from …
viruses. This is particularly due to challenges associated with separating virions from …
Evaluating and improving small subunit rRNA PCR primer coverage for bacteria, archaea, and eukaryotes using metagenomes from global ocean surveys
Small subunit rRNA (SSU rRNA) amplicon sequencing can quantitatively and
comprehensively profile natural microbiomes, representing a critically important tool for …
comprehensively profile natural microbiomes, representing a critically important tool for …
Microbial ecology of oxygen minimum zones amidst ocean deoxygenation
AM Long, SK Jurgensen, AR Petchel… - Frontiers in …, 2021 - frontiersin.org
Oxygen minimum zones (OMZs) have substantial effects on the global ecology and
biogeochemical processes of marine microbes. However, the diversity and activity of OMZ …
biogeochemical processes of marine microbes. However, the diversity and activity of OMZ …
Integrating viral metagenomics into an ecological framework
Viral metagenomics has expanded our knowledge of the ecology of uncultured viruses,
within both environmental (eg, terrestrial and aquatic) and host-associated (eg, plants and …
within both environmental (eg, terrestrial and aquatic) and host-associated (eg, plants and …