[PDF][PDF] A roadmap for the computation of persistent homology

N Otter, MA Porter, U Tillmann, P Grindrod… - EPJ Data Science, 2017 - Springer
Persistent homology (PH) is a method used in topological data analysis (TDA) to study
qualitative features of data that persist across multiple scales. It is robust to perturbations of …

[SÁCH][B] Persistence theory: from quiver representations to data analysis

SY Oudot - 2015 - ams.org
Comments• page viii, bottom of page: the following names should be added to the
acknowledgements:-Peter Landweber had an invaluable contribution to these notes. First …

The gudhi library: Simplicial complexes and persistent homology

C Maria, JD Boissonnat, M Glisse, M Yvinec - … Software–ICMS 2014: 4th …, 2014 - Springer
We present the main algorithmic and design choices that have been made to represent
complexes and compute persistent homology in the Gudhi library. The Gudhi library …

Analysis of big data in gait biomechanics: Current trends and future directions

A Phinyomark, G Petri, E Ibáñez-Marcelo… - Journal of medical and …, 2018 - Springer
The increasing amount of data in biomechanics research has greatly increased the
importance of develo** advanced multivariate analysis and machine learning techniques …

[HTML][HTML] Phat–persistent homology algorithms toolbox

U Bauer, M Kerber, J Reininghaus, H Wagner - Journal of symbolic …, 2017 - Elsevier
Phat is an open-source C++ library for the computation of persistent homology by matrix
reduction, targeted towards developers of software for topological data analysis. We aim for …

Interactive visualization of 2-d persistence modules

M Lesnick, M Wright - arxiv preprint arxiv:1512.00180, 2015 - arxiv.org
The goal of this work is to extend the standard persistent homology pipeline for exploratory
data analysis to the 2-D persistence setting, in a practical, computationally efficient way. To …

Graph filtration learning

C Hofer, F Graf, B Rieck… - … on Machine Learning, 2020 - proceedings.mlr.press
We propose an approach to learning with graph-structured data in the problem domain of
graph classification. In particular, we present a novel type of readout operation to aggregate …

A survey of topology‐based methods in visualization

C Heine, H Leitte, M Hlawitschka… - Computer Graphics …, 2016 - Wiley Online Library
This paper presents the state of the art in the area of topology‐based visualization. It
describes the process and results of an extensive annotation for generating a definition and …

Topological data analysis of contagion maps for examining spreading processes on networks

D Taylor, F Klimm, HA Harrington, M Kramár… - Nature …, 2015 - nature.com
Social and biological contagions are influenced by the spatial embeddedness of networks.
Historically, many epidemics spread as a wave across part of the Earth's surface; however …

Connectivity-optimized representation learning via persistent homology

C Hofer, R Kwitt, M Niethammer… - … conference on machine …, 2019 - proceedings.mlr.press
We study the problem of learning representations with controllable connectivity properties.
This is beneficial in situations when the imposed structure can be leveraged upstream. In …