[HTML][HTML] Invited review: Advances and applications of random regression models: From quantitative genetics to genomics

HR Oliveira, LF Brito, DAL Lourenco, FF Silva… - Journal of dairy …, 2019 - Elsevier
An important goal in animal breeding is to improve longitudinal traits; that is, traits recorded
multiple times during an individual's lifetime or physiological cycle. Longitudinal traits were …

How to cluster gene expression dynamics in response to environmental signals

Y Wang, M Xu, Z Wang, M Tao, J Zhu… - Briefings in …, 2012 - academic.oup.com
Organisms usually cope with change in the environment by altering the dynamic trajectory of
gene expression to adjust the complement of active proteins. The identification of particular …

Genetic effects and correlations between production and fertility traits and their dependency on the lactation-stage in Holstein Friesians

EM Strucken, RH Bortfeldt, J Tetens, G Thaller… - BMC genetics, 2012 - Springer
Background This study focused on the dynamics of genome-wide effects on five milk
production and eight fertility traits as well as genetic correlations between the traits. For …

Nonparametric modeling of longitudinal covariance structure in functional map** of quantitative trait loci

JS Yap, J Fan, R Wu - Biometrics, 2009 - academic.oup.com
Estimation of the covariance structure of longitudinal processes is a fundamental
prerequisite for the practical deployment of functional map** designed to study the genetic …

Dynamic semiparametric Bayesian models for genetic map** of complex trait with irregular longitudinal data

K Das, J Li, G Fu, Z Wang, R Li, R Wu - Statistics in Medicine, 2013 - Wiley Online Library
Many phenomena of fundamental importance to biology and biomedicine arise as a
dynamic curve, such as organ growth and HIV dynamics. The genetic map** of these traits …

Fine map** and analysis of candidate genes for qFT7.1, a major quantitative trait locus controlling flowering time in Brassica rapa L

G Qu, Y Gao, X Wang, W Fu, Y Sun, X Gao… - Theoretical and Applied …, 2022 - Springer
Abstract Key message qFT7. 1, a major QTL for flowering time in Brassica rapa was fine-
mapped to chromosome A07 in a 56.4-kb interval, in which the most likely candidate gene is …

Modelling effects of candidate genes on complex traits as variables over time

J Szyda, J Komisarek, I Antkowiak - Animal genetics, 2014 - Wiley Online Library
In this study, changes in gene effects for milk production traits were analysed over time.
Such changes can be expected by investigating daily milk production yields, which increase …

A novel method for analyzing genetic association with longitudinal phenotypes

D Londono, K Chen, A Musolf, R Wang… - … in genetics and …, 2013 - degruyter.com
Abstract Knowledge of genes influencing longitudinal patterns may offer information about
predicting disease progression. We developed a systematic procedure for testing …

Functional map** of genotype-environment interactions for soybean growth by a semiparametric approach

Q Li, Z Huang, M Xu, C Wang, J Gai, Y Huang, X Pang… - Plant Methods, 2010 - Springer
Background Functional map** is a powerful approach for map** quantitative trait loci
(QTLs) that control biological processes. Functional map** incorporates mathematical …

Hierarchical mixed-model expedites genome-wide longitudinal association analysis

Y Zhang, Y Song, J Gao, H Zhang… - Briefings in …, 2021 - academic.oup.com
A hierarchical random regression model (Hi-RRM) was extended into a genome-wide
association analysis for longitudinal data, which significantly reduced the dimensionality of …