The nexus between RNA-binding proteins and their effectors

S He, E Valkov, S Cheloufi, J Murn - Nature Reviews Genetics, 2023‏ - nature.com
RNA-binding proteins (RBPs) regulate essentially every event in the lifetime of an RNA
molecule, from its production to its destruction. Whereas much has been learned about RNA …

[HTML][HTML] Acetylation in pathogenesis: Revealing emerging mechanisms and therapeutic prospects

N Jiang, W Li, S Jiang, M **, L Bin, Z Yanghe, L Yao… - Biomedicine & …, 2023‏ - Elsevier
The CREB3 family of proteins, encompassing CREB3 and its four homologs (CREB3L1,
CREB3L2, CREB3L3, and CREB3L4), exerts pivotal control over cellular protein metabolism …

Liquid–liquid phase separation in diseases

X Zhang, L Yuan, W Zhang, Y Zhang, Q Wu, C Li… - MedComm, 2024‏ - Wiley Online Library
Liquid–liquid phase separation (LLPS), an emerging biophysical phenomenon, can
sequester molecules to implement physiological and pathological functions. LLPS …

pyPAGE: A framework for Addressing biases in gene-set enrichment analysis—A case study on Alzheimer's disease

A Bakulin, NB Teyssier, M Kampmann… - PLOS Computational …, 2024‏ - journals.plos.org
Inferring the driving regulatory programs from comparative analysis of gene expression data
is a cornerstone of systems biology. Many computational frameworks were developed to …

Acetylation of PGK1 at lysine 323 promotes glycolysis, cell proliferation, and metastasis in luminal A breast cancer cells

X Gao, T Pan, Y Gao, W Zhu, L Liu, W Duan, C Han… - BMC cancer, 2024‏ - Springer
Background In prior research employing iTRAQ (Isobaric Tags for Relative and Absolute
Quantitation) technology, we identified a range of proteins in breast cancer tissues exhibiting …

Exploring the landscape of post-translational modification in drug discovery

Y Cao, T Yu, Z Zhu, Y Zhang, S Sun, N Li, C Gu… - Pharmacology & …, 2024‏ - Elsevier
Post-translational modifications (PTMs) play a crucial role in regulating protein function, and
their dysregulation is frequently associated with various diseases. The emergence of …

HDAC10 inhibition represses melanoma cell growth and BRAF inhibitor resistance via upregulating SPARC expression

H Ling, Y Li, C Peng, S Yang, E Seto - NAR cancer, 2024‏ - academic.oup.com
Secreted protein acidic and rich in cysteine (SPARC), a conserved secreted glycoprotein,
plays crucial roles in regulating various biological processes. SPARC is highly expressed …

[HTML][HTML] EWSR1::ATF1 Translocation: A Common Tumor Driver of Distinct Human Neoplasms

JR Bianco, YJ Li, A Petranyi, Z Fabian - International Journal of Molecular …, 2024‏ - mdpi.com
Cancer is among the leading causes of mortality in developed countries due to limited
available therapeutic modalities and high rate of morbidity. Although malignancies might …

Elevated N1-Acetylspermidine Levels in Doxorubicin-treated MCF-7 Cancer Cells: Histone Deacetylase 10 Inhibition with an N1-Acetylspermidine Mimetic

AK Raj, KB Lokhande, K Khunteta… - Journal of Cancer …, 2024‏ - pmc.ncbi.nlm.nih.gov
Cancer drug resistance is associated with metabolic adaptation. Cancer cells have been
shown to implicate acetylated polyamines in adaptations during cell death. However …