Assembly of functional microbial ecosystems: from molecular circuits to communities
Microbes compete and cooperate with each other via a variety of chemicals and circuits.
Recently, to decipher, simulate, or reconstruct microbial communities, many researches …
Recently, to decipher, simulate, or reconstruct microbial communities, many researches …
The underground network: facilitation in soil bacteria
Our understanding of the fundamental role that soil bacteria play in the structure and
functioning of Earth's ecosystems is ever expanding, but insight into the nature of …
functioning of Earth's ecosystems is ever expanding, but insight into the nature of …
Toward a fundamental theory of taxon transitions in microbial communities
CB Ogbunugafor, S Yitbarek - Proceedings of the National …, 2024 - National Acad Sciences
Technological breakthroughs have fostered an appreciation for the microbiome and
revolutionized our understanding of many parts of the tree of life. These discoveries have …
revolutionized our understanding of many parts of the tree of life. These discoveries have …
Integrative analysis of yeast colony growth
T Gaizer, J Juhász, B Pillér, H Szakadáti… - Communications …, 2024 - nature.com
Yeast colonies are routinely grown on agar plates in everyday experimental settings to
understand basic molecular processes, produce novel drugs, improve health, and so on …
understand basic molecular processes, produce novel drugs, improve health, and so on …
Niche formation and metabolic interactions result in stable diversity in a spatially structured cyanobacterial community
Understanding how microbial communities maintain stable compositional diversity is key for
predicting community function. Studies from species pairwise interactions and synthetic …
predicting community function. Studies from species pairwise interactions and synthetic …
[HTML][HTML] Biophysical metabolic modeling of complex bacterial colony morphology
Microbial colony growth is shaped by the physics of biomass propagation and nutrient
diffusion, and by the metabolic reactions that organisms activate as a function of the …
diffusion, and by the metabolic reactions that organisms activate as a function of the …
Deconstructing taxa x taxa x environment interactions in the microbiota: A theoretical examination
A major objective of microbial ecology is to identify how the composition of microbial taxa
shapes host phenotypes. However, most studies focus on pairwise interactions and ignore …
shapes host phenotypes. However, most studies focus on pairwise interactions and ignore …