Practical application of the linkage disequilibrium method for estimating contemporary effective population size: A review

RS Waples - Molecular Ecology Resources, 2024 - Wiley Online Library
The method to estimate contemporary effective population size (N e) based on patterns of
linkage disequilibrium (LD) at unlinked loci has been widely applied to natural and …

Navigating the temporal continuum of effective population size

K Nadachowska‐Brzyska, M Konczal… - Methods in Ecology …, 2022 - Wiley Online Library
Effective population size, Ne, is a key evolutionary parameter that determines the levels of
genetic variation and efficacy of selection. Estimation and interpretation of Ne are essential …

Genoty**‐by‐sequencing for biogeography

F Vaux, L Dutoit, CI Fraser… - Journal of biogeography, 2023 - Wiley Online Library
Aim Genoty**‐by‐sequencing (GBS) and similar reduced‐representation sequencing
methods, such as restriction site‐associated DNA sequencing (RADseq), have been …

Estimating current effective sizes of large populations from a single sample of genomic marker data: A comparison of estimators by simulations

J Wang - Population Ecology, 2023 - Wiley Online Library
Genome‐wide single nucleotide polymorphisms (SNPs) data are increasingly used in
estimating the current effective population sizes (N e) for informing the conservation of …

Temporal genomics help in deciphering neutral and adaptive patterns in the contemporary evolution of kelp populations

L Reynes, L Fouqueau, D Aurelle… - Journal of …, 2024 - academic.oup.com
The impact of climate change on populations will be contingent upon their contemporary
adaptive evolution. In this study, we investigated the contemporary evolution of 4 …

Genetic diversity and inbreeding in an endangered island-dwelling parrot population following repeated population bottlenecks

D Gautschi, R Heinsohn, L Ortiz-Catedral… - Conservation …, 2024 - Springer
Genetic diversity and population structure can have important implications for the
management of threatened species. This is particularly true for small, isolated populations …

Evolutionarily labile dispersal behavior and discontinuous habitats enhance population differentiation in island versus continentally distributed swallows

GG Broyles, BM Myers, NR Friedman, DF Gawin… - …, 2023 - academic.oup.com
The causes of population divergence in vagile groups remain a paradox in evolutionary
biology: dispersive species should be able to colonize new areas, a prerequisite for …

Evidence that genetic drift not adaptation drives fast‐Z and large‐Z effects in Ficedula flycatchers

MA Chase, M Vilcot, CF Mugal - Molecular Ecology, 2024 - Wiley Online Library
The sex chromosomes have been hypothesized to play a key role in driving adaptation and
speciation across many taxa. The reason for this is thought to be the hemizygosity of the …

The role of recombination dynamics in sha** signatures of direct and indirect selection across the Ficedula flycatcher genome

MA Chase, M Vilcot, CF Mugal - Proceedings of the …, 2024 - royalsocietypublishing.org
Recombination is a central evolutionary process that reshuffles combinations of alleles
along chromosomes, and consequently is expected to influence the efficacy of direct …

Genetic diversity and demographic history of the leopard seal: A Southern Ocean top predator

AN Bender, DJ Krause, ME Goebel, JI Hoffman… - PloS One, 2023 - journals.plos.org
Leopard seals (Hydrurga leptonyx) are top predators that can exert substantial top-down
control of their Antarctic prey species. However, population trends and genetic diversity of …