[PDF][PDF] Satellite cells and skeletal muscle regeneration

NA Dumont, CF Bentzinger, MC Sincennes… - Compr …, 2015‏ - researchgate.net
Skeletal muscles are essential for vital functions such as movement, postural support,
breathing, and thermogenesis. Muscle tissue is largely composed of long, postmitotic …

Transcriptional enhancers: from properties to genome-wide predictions

D Shlyueva, G Stampfel, A Stark - Nature Reviews Genetics, 2014‏ - nature.com
Cellular development, morphology and function are governed by precise patterns of gene
expression. These are established by the coordinated action of genomic regulatory …

Genome-wide analysis reveals characteristics of off-target sites bound by the Cas9 endonuclease

C Kuscu, S Arslan, R Singh, J Thorpe, M Adli - Nature biotechnology, 2014‏ - nature.com
RNA-guided genome editing with the CRISPR-Cas9 system has great potential for basic
and clinical research, but the determinants of targeting specificity and the extent of off-target …

Library construction for next-generation sequencing: overviews and challenges

SR Head, HK Komori, SA LaMere, T Whisenant… - …, 2014‏ - Taylor & Francis
High-throughput sequencing, also known as next-generation sequencing (NGS), has
revolutionized genomic research. In recent years, NGS technology has steadily improved …

ChIP–seq and beyond: new and improved methodologies to detect and characterize protein–DNA interactions

TS Furey - Nature Reviews Genetics, 2012‏ - nature.com
Chromatin immunoprecipitation experiments followed by sequencing (ChIP–seq) detect
protein–DNA binding events and chemical modifications of histone proteins. Challenges in …

Histone modifications for human epigenome analysis

H Kimura - Journal of human genetics, 2013‏ - nature.com
Histones function both positively and negatively in the regulation of gene expression, mainly
governed by post-translational modifications on specific amino acid residues. Although …

Epigenetic basis of mental illness

EJ Nestler, CJ Peña, M Kundakovic… - The …, 2016‏ - journals.sagepub.com
Psychiatric disorders are complex multifactorial illnesses involving chronic alterations in
neural circuit structure and function as well as likely abnormalities in glial cells. While …

[HTML][HTML] Map** human epigenomes

CM Rivera, B Ren - Cell, 2013‏ - cell.com
As the second dimension to the genome, the epigenome contains key information specific to
every type of cells. Thousands of human epigenome maps have been produced in recent …

Mutations in regulators of the epigenome and their connections to global chromatin patterns in cancer

C Plass, SM Pfister, AM Lindroth, O Bogatyrova… - Nature reviews …, 2013‏ - nature.com
Malignancies are characterized by extensive global reprogramming of epigenetic patterns,
including gains or losses in DNA methylation and changes to histone marks. Furthermore …

Trans-omics: how to reconstruct biochemical networks across multiple 'omic'layers

K Yugi, H Kubota, A Hatano, S Kuroda - Trends in biotechnology, 2016‏ - cell.com
We propose 'trans-omic'analysis for reconstructing global biochemical networks across
multiple omic layers by use of both multi-omic measurements and computational data …