Horizontal gene transfer in archaea—from mechanisms to genome evolution

U Gophna, N Altman-Price - Annual Review of Microbiology, 2022 - annualreviews.org
Archaea remains the least-studied and least-characterized domain of life despite its
significance not just to the ecology of our planet but also to the evolution of eukaryotes. It is …

DNA repair in the archaea—an emerging picture

MF White, T Allers - FEMS microbiology reviews, 2018 - academic.oup.com
There has long been a fascination in the DNA repair pathways of archaea, for two main
reasons. Firstly, many archaea inhabit extreme environments where the rate of physical …

Inteins in science: evolution to application

A Nanda, SS Nasker, A Mehra, S Panda, S Nayak - Microorganisms, 2020 - mdpi.com
Inteins are mobile genetic elements that apply standard enzymatic strategies to excise
themselves post-translationally from the precursor protein via protein splicing. Since their …

Adaptive Gene Content and Allele Distribution Variations in the Wild and Domesticated Populations of Saccharomyces cerevisiae

DY Han, PJ Han, K Rumbold, AD Koricha… - Frontiers in …, 2021 - frontiersin.org
Recent studies on population genomics of Saccharomyces cerevisiae have substantially
improved our understanding of the genetic diversity and domestication history of the yeast …

Intein splicing efficiency and RadA levels can control the mode of archaeal DNA replication

GLS Liman, CW Lennon, JL Mandley, AM Galyon… - Science …, 2024 - science.org
Inteins (intervening proteins), mobile genetic elements removed through protein splicing,
often interrupt proteins required for DNA replication, recombination, and repair. An …

Haloferax volcanii—a model archaeon for studying DNA replication and repair

P Pérez-Arnaiz, A Dattani, V Smith… - Open Biology, 2020 - royalsocietypublishing.org
The tree of life shows the relationship between all organisms based on their common
ancestry. Until 1977, it comprised two major branches: prokaryotes and eukaryotes. Work by …

Protein splicing of a recombinase intein induced by ssDNA and DNA damage

CW Lennon, M Stanger, M Belfort - Genes & development, 2016 - genesdev.cshlp.org
Inteins (or protein introns) autocatalytically excise themselves through protein splicing. We
challenge the long-considered notion that inteins are merely molecular parasites and posit …

Genomic Instability Evolutionary Footprints on Human Health: Driving Forces or Side Effects?

L Veschetti, M Treccani, E De Tomi… - International Journal of …, 2023 - mdpi.com
In this work, we propose a comprehensive perspective on genomic instability comprising not
only the accumulation of mutations but also telomeric shortening, epigenetic alterations and …

The patchy distribution of restriction–modification system genes and the conservation of orphan methyltransferases in halobacteria

MS Fullmer, M Ouellette, AS Louyakis, RT Papke… - Genes, 2019 - mdpi.com
Restriction–modification (RM) systems in bacteria are implicated in multiple biological roles
ranging from defense against parasitic genetic elements, to selfish addiction cassettes, and …

Conditional DnaB protein splicing is reversibly inhibited by zinc in mycobacteria

D Woods, S Vangaveti, I Egbanum, AM Sweeney, Z Li… - MBio, 2020 - Am Soc Microbiol
Inteins, as posttranslational regulatory elements, can tune protein function to environmental
changes by conditional protein splicing (CPS). Translated as subdomains interrupting host …