Automated tilt series alignment and tomographic reconstruction in IMOD

DN Mastronarde, SR Held - Journal of structural biology, 2017 - Elsevier
Automated tomographic reconstruction is now possible in the IMOD software package,
including the merging of tomograms taken around two orthogonal axes. Several …

Contributed review: Review of integrated correlative light and electron microscopy

FJ Timmermans, C Otto - Review of Scientific Instruments, 2015 - pubs.aip.org
New developments in the field of microscopy enable to acquire increasing amounts of
information from large sample areas and at an increased resolution. Depending on the …

[HTML][HTML] New hardware and workflows for semi-automated correlative cryo-fluorescence and cryo-electron microscopy/tomography

M Schorb, L Gaechter, O Avinoam, F Sieckmann… - Journal of structural …, 2017 - Elsevier
Correlative light and electron microscopy allows features of interest defined by fluorescence
signals to be located in an electron micrograph of the same sample. Rare dynamic events or …

Correlia: an ImageJ plug‐in to co‐register and visualise multimodal correlative micrographs

F Rohde, ULFD BRAUMANN… - Journal of microscopy, 2020 - Wiley Online Library
The correlation of different microscopic imaging techniques alongside with microanalytical
methods is crucial to better understand biological processes on a subcellular level. For that …

Distinguishing signal from autofluorescence in cryogenic correlated light and electron microscopy of mammalian cells

SD Carter, SK Mageswaran, ZJ Farino… - Journal of structural …, 2018 - Elsevier
In cryogenic correlated light and electron microscopy (cryo-CLEM), frozen targets of interest
are identified and located on EM grids by fluorescence microscopy and then imaged at …

Positional correlative anatomy of invertebrate model organisms increases efficiency of TEM data production

I Kolotuev - Microscopy and Microanalysis, 2014 - academic.oup.com
Transmission electron microscopy (TEM) is an important tool for studies in cell biology, and
is essential to address research questions from bacteria to animals. Recent technological …

Microtubule length correlates with spindle length in C. elegans meiosis

V Zimyanin, S Redemann - Cytoskeleton, 2024 - Wiley Online Library
The accurate segregation of chromosomes during female meiosis relies on the precise
assembly and function of the meiotic spindle, a dynamic structure primarily composed of …

Fluorescence labeling methods influence the aggregation process of α-syn in vitro differently

S Jadavi, S Dante, L Civiero, M Sandre, L Bubacco… - Nanoscale, 2023 - pubs.rsc.org
In a previous study, the coexistence of different aggregation pathways of insulin and β-
amyloid (Aβ) peptides was demonstrated by correlative stimulated emission depletion …

Large-scale electron tomography of cells using SerialEM and IMOD

E O'Toole, P van der Heide, J Richard McIntosh… - … tomography and related …, 2018 - Springer
We have developed methods to compute tomographic reconstructions of relatively large
areas and volumes of sectioned cells using SerialEM and IMOD. The SerialEM program has …

Correlative light-and electron microscopy using quantum dot nanoparticles

MC Killingsworth, YV Bobryshev - Journal of Visualized …, 2016 - pmc.ncbi.nlm.nih.gov
A method is described whereby quantum dot (QD) nanoparticles can be used for correlative
immunocytochemical studies of human pathology tissue using widefield fluorescence light …