The multifaceted roles of PARP1 in DNA repair and chromatin remodelling

A Ray Chaudhuri, A Nussenzweig - Nature reviews Molecular cell …, 2017 - nature.com
Cells are exposed to various endogenous and exogenous insults that induce DNA damage,
which, if unrepaired, impairs genome integrity and leads to the development of various …

[HTML][HTML] Histone ubiquitination: an integrative signaling platform in genome stability

F Mattiroli, L Penengo - Trends in Genetics, 2021 - cell.com
Complex mechanisms are in place to maintain genome stability. Ubiquitination of chromatin
plays a central role in these mechanisms. The ever-growing complexity of the ubiquitin (Ub) …

The regulatory enzymes and protein substrates for the lysine β-hydroxybutyrylation pathway

H Huang, D Zhang, Y Weng, K Delaney, Z Tang… - Science …, 2021 - science.org
Metabolism-mediated epigenetic changes represent an adapted mechanism for cellular
signaling, in which lysine acetylation and methylation have been the historical focus of …

A protein interaction landscape of breast cancer

M Kim, J Park, M Bouhaddou, K Kim, A Rojc, M Modak… - Science, 2021 - science.org
INTRODUCTION Advances in DNA sequencing technology have enabled the widespread
analysis of breast tumor genomes, creating a catalog of genetic mutations that may initiate or …

Understanding nucleotide excision repair and its roles in cancer and ageing

JA Marteijn, H Lans, W Vermeulen… - … reviews Molecular cell …, 2014 - nature.com
Nucleotide excision repair (NER) eliminates various structurally unrelated DNA lesions by a
multiwise'cut and patch'-type reaction. The global genome NER (GG-NER) subpathway …

Challenges of big data analysis

J Fan, F Han, H Liu - National science review, 2014 - academic.oup.com
Big Data bring new opportunities to modern society and challenges to data scientists. On the
one hand, Big Data hold great promises for discovering subtle population patterns and …

Chromatin and nucleosome dynamics in DNA damage and repair

MH Hauer, SM Gasser - Genes & development, 2017 - genesdev.cshlp.org
Chromatin is organized into higher-order structures that form subcompartments in
interphase nuclei. Different categories of specialized enzymes act on chromatin and …

Nucleotide excision repair in eukaryotes

OD Schärer - Cold Spring Harbor perspectives in biology, 2013 - cshperspectives.cshlp.org
Nucleotide excision repair (NER) is the main pathway used by mammals to remove bulky
DNA lesions such as those formed by UV light, environmental mutagens, and some cancer …

[HTML][HTML] Chromatin modifications and their function

T Kouzarides - Cell, 2007 - cell.com
The surface of nucleosomes is studded with a multiplicity of modifications. At least eight
different classes have been characterized to date and many different sites have been …

Structure and function of WD40 domain proteins

C Xu, J Min - Protein & cell, 2011 - Springer
The WD40 domain exhibits a β-propeller architecture, often comprising seven blades. The
WD40 domain is one of the most abundant domains and also among the top interacting …