Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer

E Lerner, T Cordes, A Ingargiola, Y Alhadid, SY Chung… - Science, 2018 - science.org
BACKGROUND Biomolecular mechanisms are typically inferred from static structural
“snapshots” obtained by x-ray crystallography, nuclear magnetic resonance (NMR) …

ABC transporter research: going strong 40 years on

FL Theodoulou, ID Kerr - Biochemical Society Transactions, 2015 - portlandpress.com
In most organisms, ABC transporters constitute one of the largest families of membrane
proteins. In humans, their functions are diverse and underpin numerous key physiological …

Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins

G Agam, C Gebhardt, M Popara, R Mächtel, J Folz… - Nature …, 2023 - nature.com
Single-molecule Förster-resonance energy transfer (smFRET) experiments allow the study
of biomolecular structure and dynamics in vitro and in vivo. We performed an international …

Precision and accuracy of single-molecule FRET measurements—a multi-laboratory benchmark study

B Hellenkamp, S Schmid, O Doroshenko… - Nature …, 2018 - nature.com
Single-molecule Förster resonance energy transfer (smFRET) is increasingly being used to
determine distances, structures, and dynamics of biomolecules in vitro and in vivo. However …

An updated structural classification of substrate‐binding proteins

GH Scheepers, JA Lycklama a Nijeholt… - FEBS …, 2016 - Wiley Online Library
Substrate‐binding proteins (SBP s) play an important role in solute uptake and signal
transduction. In 2010, Berntsson et al. classified the 114 organism‐specific SBP structures …

New Insights into the Cooperativity and Dynamics of Dimeric Enzymes

KW Chen, TY Sun, YD Wu - Chemical Reviews, 2023 - ACS Publications
A survey of protein databases indicates that the majority of enzymes exist in oligomeric
forms, with about half of those found in the UniProt database being homodimeric …

Single-molecule FRET methods to study the dynamics of proteins at work

H Mazal, G Haran - Current opinion in biomedical engineering, 2019 - Elsevier
Feynman commented that “Everything that living things do can be understood in terms of the
jiggling and wiggling of atoms”. Proteins can jiggle and wiggle large structural elements …

Direct electrical quantification of glucose and asparagine from bodily fluids using nanopores

NS Galenkamp, M Soskine, J Hermans… - Nature …, 2018 - nature.com
Crucial steps in the miniaturisation of biosensors are the conversion of a biological signal
into an electrical current as well as the direct sampling of bodily fluids. Here we show that …

Conformational and dynamic plasticity in substrate-binding proteins underlies selective transport in ABC importers

M de Boer, G Gouridis, R Vietrov, SL Begg… - Elife, 2019 - elifesciences.org
Substrate-binding proteins (SBPs) are associated with ATP-binding cassette importers and
switch from an open to a closed conformation upon substrate binding, providing specificity …

The fork protection complex recruits FACT to reorganize nucleosomes during replication

B Safaric, E Chacin, MJ Scherr, L Rajappa… - Nucleic acids …, 2022 - academic.oup.com
Chromosome replication depends on efficient removal of nucleosomes by accessory factors
to ensure rapid access to genomic information. Here, we show this process requires …