Visualization of omics data for systems biology

N Gehlenborg, SI O'donoghue, NS Baliga… - Nature …, 2010 - nature.com
High-throughput studies of biological systems are rapidly accumulating a wealth of'omics'-
scale data. Visualization is a key aspect of both the analysis and understanding of these …

Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future

GA Pavlopoulos, D Malliarakis, N Papanikolaou… - …, 2015 - academic.oup.com
Abstract “Α picture is worth a thousand words.” This widely used adage sums up in a few
words the notion that a successful visual representation of a concept should enable easy …

The ocean sampling day consortium

A Kopf, M Bicak, R Kottmann, J Schnetzer, I Kostadinov… - Gigascience, 2015 - Springer
Abstract Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial
Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine …

It is time to apply biclustering: a comprehensive review of biclustering applications in biological and biomedical data

J ** towards a better Crocus phenome
AM Husaini, SA Haq, AJL Jiménez - Molecular Biology Reports, 2022 - Springer
Saffron is a unique plant in many aspects, and its cellular processes are regulated at
multiple levels. The genetic makeup in the form of eight chromosome triplets (2n= 3x= 24) …

Biset: Semantic edge bundling with biclusters for sensemaking

M Sun, P Mi, C North… - IEEE transactions on …, 2015 - ieeexplore.ieee.org
Identifying coordinated relationships is an important task in data analytics. For example, an
intelligence analyst might want to discover three suspicious people who all visited the same …

Biclustering of gene expression data by correlation-based scatter search

JA Nepomuceno, A Troncoso, JS Aguilar-Ruiz - BioData mining, 2011 - Springer
Background The analysis of data generated by microarray technology is very useful to
understand how the genetic information becomes functional gene products. Biclustering …