Transcriptome analysis of potato shoots, roots and stolons under nitrogen stress

JK Tiwari, T Buckseth, R Zinta, A Saraswati, RK Singh… - Scientific reports, 2020 - nature.com
Potato crop requires high dose of nitrogen (N) to produce high tuber yield. Excessive
application of N causes environmental pollution and increases cost of production. Hence …

UVC light modulates vitamin C and phenolic biosynthesis in acerola fruit: Role of increased mitochondria activity and ROS production

MC Rabelo, WY Bang, V Nair, RE Alves… - Scientific Reports, 2020 - nature.com
The effects of ultraviolet-C light (UVC) on vitamin C and phenolic compounds in acerola
during postharvest storage were investigated in order to elucidate the mechanism inducing …

Reference gene selection for normalization of RT-qPCR gene expression data from Actinidia deliciosa leaves infected with Pseudomonas syringae pv. actinidiae

M Petriccione, F Mastrobuoni, L Zampella… - Scientific reports, 2015 - nature.com
Normalization of data, by choosing the appropriate reference genes (RGs), is fundamental
for obtaining reliable results in reverse transcription-quantitative PCR (RT-qPCR). In this …

Comparative transcriptome analyses in contrasting onion (Allium cepa L.) genotypes for drought stress

P Ghodke, K Khandagale, A Thangasamy, A Kulkarni… - PLoS …, 2020 - journals.plos.org
Onion (Allium cepa L.) is an important vegetable crop widely grown for diverse culinary and
nutraceutical properties. Being a shallow-rooted plant, it is prone to drought. In the present …

Transcriptome analysis reveals genes associated with late blight resistance in potato

N Bhatia, JK Tiwari, C Kumari, R Zinta, S Sharma… - Scientific Reports, 2024 - nature.com
Late blight is a serious disease of potato worldwide. Our study aimed to unveil genes
involved in late blight resistance in potato by RNA-seq analysis after artificial inoculation …

De novo transcriptome profiling and development of novel secondary metabolites based genic SSRs in medicinal plant Phyllanthus emblica L. (Aonla)

B Kapoor, M Sharma, R Sharma, A Zadokar… - Scientific Reports, 2023 - nature.com
Abstract Phyllanthus emblica (Aonla, Indian Gooseberry) is known to have various medicinal
properties, but studies to understand its genetic structure are limited. Among the various …

Genome-wide identification and characterization of microRNAs by small RNA sequencing for low nitrogen stress in potato

JK Tiwari, T Buckseth, R Zinta, A Saraswati, RK Singh… - PLoS …, 2020 - journals.plos.org
Nitrogen is an important nutrient for plant growth and tuber quality of potato. Since potato
crop requires high dose of N, improving nitrogen use efficiency (NUE) of plant is an …

Adaptive differentiation coincides with local bioclimatic conditions along an elevational cline in populations of a lichen-forming fungus

F Dal Grande, R Sharma, A Meiser… - BMC Evolutionary …, 2017 - Springer
Background Many fungal species occur across a variety of habitats. Particularly lichens,
fungi forming symbioses with photosynthetic partners, have evolved remarkable tolerances …

A simple and efficient protocol for isolation of high quality functional RNA from different tissues of turmeric (Curcuma longa L.)

K Deepa, TE Sheeja, R Santhi, B Sasikumar… - … and Molecular Biology …, 2014 - Springer
Many experiments in plant molecular biology require processing of a large number of RNA
samples and in some cases large quantities are required for a single application. In turmeric …