Past and future use of wild relatives in crop breeding

H Dempewolf, G Baute, J Anderson, B Kilian… - Crop …, 2017 - Wiley Online Library
Wild species related to agricultural crops (crop wild relatives, or CWR) can increase the
adaptive capacity of agricultural systems around the world. They represent a large pool of …

BED-domain-containing immune receptors confer diverse resistance spectra to yellow rust

C Marchal, J Zhang, P Zhang, P Fenwick… - Nature plants, 2018 - nature.com
Crop diseases reduce wheat yields by~ 25% globally and thus pose a major threat to global
food security. Genetic resistance can reduce crop losses in the field and can be selected …

A haplotype-led approach to increase the precision of wheat breeding

J Brinton, RH Ramirez-Gonzalez, J Simmonds… - Communications …, 2020 - nature.com
Crop productivity must increase at unprecedented rates to meet the needs of the growing
worldwide population. Exploiting natural variation for the genetic improvement of crops plays …

Temporal dynamic methods for bulk RNA-Seq time series data

VKS Oh, RW Li - Genes, 2021 - mdpi.com
Dynamic studies in time course experimental designs and clinical approaches have been
widely used by the biomedical community. These applications are particularly relevant in …

Domestication of Oryza species eco-evolutionarily shapes bacterial and fungal communities in rice seed

H Kim, KK Lee, J Jeon, WA Harris, YH Lee - Microbiome, 2020 - Springer
Background Plant-associated microbiomes, which are shaped by host and environmental
factors, support their hosts by providing nutrients and attenuating abiotic and biotic stresses …

Prospects for Trifolium Improvement Through Germplasm Characterisation and Pre-breeding in New Zealand and Beyond

LM Egan, RW Hofmann, K Ghamkhar… - Frontiers in Plant …, 2021 - frontiersin.org
Trifolium is the most used pastoral legume genus in temperate grassland systems, and a
common feature in meadows and open space areas in cities and parks. Breeding of …

A large-scale pedigree resource of wheat reveals evidence for adaptation and selection by breeders

N Fradgley, KA Gardner, J Cockram, J Elderfield… - PLoS …, 2019 - journals.plos.org
Information on crop pedigrees can be used to help maximise genetic gain in crop breeding
and allow efficient management of genetic resources. We present a pedigree resource of …

Hybrid origins of citrus varieties inferred from DNA marker analysis of nuclear and organelle genomes

T Shimizu, A Kitajima, K Nonaka, T Yoshioka, S Ohta… - PLoS …, 2016 - journals.plos.org
Most indigenous citrus varieties are assumed to be natural hybrids, but their parentage has
so far been determined in only a few cases because of their wide genetic diversity and the …

Diversity and heterotic patterns in North American proprietary dent maize germplasm

MR White, MA Mikel, N de Leon, SM Kaeppler - Crop Science, 2020 - Wiley Online Library
Publicly available maize (Zea mays L.) inbred lines with expired Plant Variety Protection
certificates (ex‐PVP) constitute the elite germplasm used in hybrids grown by North …

Multi‐model GWAS reveals key loci for horticultural traits in reconstructed garden strawberry

A Rehman, T Iso‐Touru, J Junkers… - Physiologia …, 2024 - Wiley Online Library
The cultivated garden strawberry (Fragaria× ananassa) has a rich history, originating from
the hybridization of two wild octoploid strawberry species in the 18th century. Two‐step …