[HTML][HTML] Networks beyond pairwise interactions: Structure and dynamics

F Battiston, G Cencetti, I Iacopini, V Latora, M Lucas… - Physics reports, 2020 - Elsevier
The complexity of many biological, social and technological systems stems from the richness
of the interactions among their units. Over the past decades, a variety of complex systems …

Complex networks: Structure and dynamics

S Boccaletti, V Latora, Y Moreno, M Chavez… - Physics reports, 2006 - Elsevier
Coupled biological and chemical systems, neural networks, social interacting species, the
Internet and the World Wide Web, are only a few examples of systems composed by a large …

Network biology: understanding the cell's functional organization

AL Barabasi, ZN Oltvai - Nature reviews genetics, 2004 - nature.com
A key aim of postgenomic biomedical research is to systematically catalogue all molecules
and their interactions within a living cell. There is a clear need to understand how these …

Molecular ecological network analyses

Y Deng, YH Jiang, Y Yang, Z He, F Luo, J Zhou - BMC bioinformatics, 2012 - Springer
Background Understanding the interaction among different species within a community and
their responses to environmental changes is a central goal in ecology. However, defining …

[BOOK][B] An introduction to systems biology: design principles of biological circuits

U Alon - 2019 - api.taylorfrancis.com
Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

[BOOK][B] Dynamical processes on complex networks

A Barrat, M Barthelemy, A Vespignani - 2008 - books.google.com
The availability of large data sets has allowed researchers to uncover complex properties
such as large-scale fluctuations and heterogeneities in many networks, leading to the …

Network motifs: theory and experimental approaches

U Alon - Nature Reviews Genetics, 2007 - nature.com
Transcription regulation networks control the expression of genes. The transcription
networks of well-studied microorganisms appear to be made up of a small set of recurring …

Organization, development and function of complex brain networks

O Sporns, DR Chialvo, M Kaiser, CC Hilgetag - Trends in cognitive …, 2004 - cell.com
Recent research has revealed general principles in the structural and functional
organization of complex networks which are shared by various natural, social and …

Networks formed from interdependent networks

J Gao, SV Buldyrev, HE Stanley, S Havlin - Nature physics, 2012 - nature.com
Complex networks appear in almost every aspect of science and technology. Although most
results in the field have been obtained by analysing isolated networks, many real-world …

Colloquium: Criticality and dynamical scaling in living systems

MA Munoz - Reviews of Modern Physics, 2018 - APS
A celebrated and controversial hypothesis suggests that some biological systems—parts,
aspects, or groups of them—may extract important functional benefits from operating at the …