Genoty**-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding

J He, X Zhao, A Laroche, ZX Lu, HK Liu… - Frontiers in plant …, 2014 - frontiersin.org
Marker-assisted selection (MAS) refers to the use of molecular markers to assist phenotypic
selections in crop improvement. Several types of molecular markers, such as single …

Systematics, diversity, genetics, and evolution of wild and cultivated potatoes

DM Spooner, M Ghislain, R Simon, SH Jansky… - The botanical …, 2014 - Springer
The common potato, Solanum tuberosum L., is the third most important food crop and is
grown and consumed worldwide. Indigenous cultivated (landrace) potatoes and wild potato …

Development and evaluation of SoySNP50K, a high-density genoty** array for soybean

Q Song, DL Hyten, G Jia, CV Quigley, EW Fickus… - PloS one, 2013 - journals.plos.org
The objective of this research was to identify single nucleotide polymorphisms (SNPs) and to
develop an Illumina Infinium BeadChip that contained over 50,000 SNPs from soybean …

A genome-wide association study of seed protein and oil content in soybean

EY Hwang, Q Song, G Jia, JE Specht, DL Hyten… - BMC genomics, 2014 - Springer
Background Association analysis is an alternative to conventional family-based methods to
detect the location of gene (s) or quantitative trait loci (QTL) and provides relatively high …

An improved genoty** by sequencing (GBS) approach offering increased versatility and efficiency of SNP discovery and genoty**

H Sonah, M Bastien, E Iquira, A Tardivel, G Légaré… - PloS one, 2013 - journals.plos.org
Highly parallel SNP genoty** platforms have been developed for some important crop
species, but these platforms typically carry a high cost per sample for first-time or small-scale …

Association Map** of Kernel Size and Milling Quality in Wheat (Triticum aestivum L.) Cultivars

F Breseghello, ME Sorrells - Genetics, 2006 - academic.oup.com
Association map** is a method for detection of gene effects based on linkage
disequilibrium (LD) that complements QTL analysis in the development of tools for molecular …

Functional markers in plants

JR Andersen, T Lübberstedt - Trends in plant science, 2003 - cell.com
Different approaches (including association studies) have recently been adopted for the
functional characterization of allelic variation in plants and to identify sequence motifs …

Impacts of genetic bottlenecks on soybean genome diversity

DL Hyten, Q Song, Y Zhu, IY Choi… - Proceedings of the …, 2006 - National Acad Sciences
Soybean has undergone several genetic bottlenecks. These include domestication in Asia
to produce numerous Asian landraces, introduction of relatively few landraces to North …

Linkage disequilibrium and association studies in higher plants: present status and future prospects

PK Gupta, S Rustgi, PL Kulwal - Plant molecular biology, 2005 - Springer
During the last two decades, DNA-based molecular markers have been extensively utilized
for a variety of studies in both plant and animal systems. One of the major uses of these …

A next-generation sequencing method for genoty**-by-sequencing of highly heterozygous autotetraploid potato

JG Uitdewilligen, AMA Wolters, BB D'hoop, TJA Borm… - PloS one, 2013 - journals.plos.org
Assessment of genomic DNA sequence variation and genotype calling in autotetraploids
implies the ability to distinguish among five possible alternative allele copy number states …