Topology applied to machine learning: From global to local

H Adams, M Moy - Frontiers in Artificial Intelligence, 2021 - frontiersin.org
Through the use of examples, we explain one way in which applied topology has evolved
since the birth of persistent homology in the early 2000s. The first applications of topology to …

The simplex tree: An efficient data structure for general simplicial complexes

JD Boissonnat, C Maria - Algorithmica, 2014 - Springer
This paper introduces a new data structure, called simplex tree, to represent abstract
simplicial complexes of any dimension. All faces of the simplicial complex are explicitly …

Topological data analysis

A Zomorodian - Advances in applied and computational topology, 2012 - books.google.com
Scientific data is often in the form of a finite set of noisy points, sampled from an unknown
space, and embedded in a high-dimensional space. Topological data analysis focuses on …

Learning algebraic varieties from samples

P Breiding, S Kališnik, B Sturmfels… - Revista Matemática …, 2018 - Springer
We seek to determine a real algebraic variety from a fixed finite subset of points. Existing
methods are studied and new methods are developed. Our focus lies on aspects of topology …

Morse complexes for shape segmentation and homological analysis: discrete models and algorithms

L De Floriani, U Fugacci, F Iuricich… - Computer graphics …, 2015 - Wiley Online Library
Morse theory offers a natural and mathematically‐sound tool for shape analysis and
understanding. It allows studying the behavior of a scalar function defined on a manifold …

Geometric anomaly detection in data

BJ Stolz, J Tanner, HA Harrington… - Proceedings of the …, 2020 - National Acad Sciences
The quest for low-dimensional models which approximate high-dimensional data is
pervasive across the physical, natural, and social sciences. The dominant paradigm …

Exhaustive conformational sampling of complex fused ring macrocycles using inverse kinematics

EA Coutsias, KW Lexa, MJ Wester… - Journal of chemical …, 2016 - ACS Publications
Natural product and synthetic macrocycles are chemically and topologically diverse. An
efficient, accurate, and general method for generating macrocycle conformations would …

Evasion paths in mobile sensor networks

H Adams, G Carlsson - The International Journal of Robotics …, 2015 - journals.sagepub.com
Suppose that ball-shaped sensors wander in a bounded domain. A sensor does not know its
location but does know when it overlaps a nearby sensor. We say that an evasion path …

Metric reconstruction via optimal transport

M Adamaszek, H Adams, F Frick - SIAM Journal on Applied Algebra and …, 2018 - SIAM
Given a sample of points X in a metric space M and a scale r>0, the Vietoris--Rips simplicial
complex VR(X;r) is a standard construction to attempt to recover M from X up to homotopy …

Persistence theory: from quiver representations to data analysis

SY Oudot - Mathematical Surveys and Monographs, 2015 - ams.org
Comments• page viii, bottom of page: the following names should be added to the
acknowledgements:-Peter Landweber had an invaluable contribution to these notes. First …