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Tara Oceans: towards global ocean ecosystems biology
S Sunagawa, SG Acinas, P Bork, C Bowler… - Nature Reviews …, 2020 - nature.com
A planetary-scale understanding of the ocean ecosystem, particularly in light of climate
change, is crucial. Here, we review the work of Tara Oceans, an international …
change, is crucial. Here, we review the work of Tara Oceans, an international …
Globally consistent quantitative observations of planktonic ecosystems
In this paper we review the technologies available to make globally quantitative
observations of particles in general—and plankton in particular—in the world oceans, and …
observations of particles in general—and plankton in particular—in the world oceans, and …
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA
KH Kjær, M Winther Pedersen, B De Sanctis… - Nature, 2022 - nature.com
Abstract Late Pliocene and Early Pleistocene epochs 3.6 to 0.8 million years ago had
climates resembling those forecasted under future warming. Palaeoclimatic records show …
climates resembling those forecasted under future warming. Palaeoclimatic records show …
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea… - Nucleic acids …, 2020 - academic.oup.com
Abstract MGnify (http://www. ebi. ac. uk/metagenomics) provides a free to use platform for the
assembly, analysis and archiving of microbiome data derived from sequencing microbial …
assembly, analysis and archiving of microbiome data derived from sequencing microbial …
Global trends in marine plankton diversity across kingdoms of life
FM Ibarbalz, N Henry, MC Brandão, S Martini… - Cell, 2019 - cell.com
The ocean is home to myriad small planktonic organisms that underpin the functioning of
marine ecosystems. However, their spatial patterns of diversity and the underlying drivers …
marine ecosystems. However, their spatial patterns of diversity and the underlying drivers …
Clades of huge phages from across Earth's ecosystems
B Al-Shayeb, R Sachdeva, LX Chen, F Ward, P Munk… - Nature, 2020 - nature.com
Bacteriophages typically have small genomes and depend on their bacterial hosts for
replication. Here we sequenced DNA from diverse ecosystems and found hundreds of …
replication. Here we sequenced DNA from diverse ecosystems and found hundreds of …
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
S Roux, JR Brum, BE Dutilh, S Sunagawa… - Nature, 2016 - nature.com
Ocean microbes drive biogeochemical cycling on a global scale. However, this cycling is
constrained by viruses that affect community composition, metabolic activity, and …
constrained by viruses that affect community composition, metabolic activity, and …
[HTML][HTML] VSEARCH: a versatile open source tool for metagenomics
Background VSEARCH is an open source and free of charge multithreaded 64-bit tool for
processing and preparing metagenomics, genomics and population genomics nucleotide …
processing and preparing metagenomics, genomics and population genomics nucleotide …
Insights into global diatom distribution and diversity in the world's ocean
Diatoms (Bacillariophyta) constitute one of the most diverse and ecologically important
groups of phytoplankton. They are considered to be particularly important in nutrient-rich …
groups of phytoplankton. They are considered to be particularly important in nutrient-rich …
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi… - Nature, 2016 - nature.com
The biological carbon pump is the process by which CO2 is transformed to organic carbon
via photosynthesis, exported through sinking particles, and finally sequestered in the deep …
via photosynthesis, exported through sinking particles, and finally sequestered in the deep …