Evolution of gene duplication in plants

N Panchy, M Lehti-Shiu, SH Shiu - Plant physiology, 2016 - academic.oup.com
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

W Zhuang, H Chen, M Yang, J Wang, MK Pandey… - Nature …, 2019 - nature.com
High oil and protein content make tetraploid peanut a leading oil and food legume. Here we
report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 …

New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication

S Kim, J Park, SI Yeom, YM Kim, E Seo, KT Kim… - Genome biology, 2017 - Springer
Background Transposable elements are major evolutionary forces which can cause new
genome structure and species diversification. The role of transposable elements in the …

Advances in omics research on peanut response to biotic stresses

R Huang, H Li, C Gao, W Yu, S Zhang - Frontiers in Plant Science, 2023 - frontiersin.org
Peanut growth, development, and eventual production are constrained by biotic and abiotic
stresses resulting in serious economic losses. To understand the response and tolerance …

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

KW Jordan, S Wang, Y Lun, LJ Gardiner… - Genome biology, 2015 - Springer
Background Bread wheat is an allopolyploid species with a large, highly repetitive genome.
To investigate the impact of selection on variants distributed among homoeologous wheat …

Genome-wide map** of NBS-LRR genes and their association with disease resistance in soybean

YJ Kang, KH Kim, S Shim, MY Yoon, S Sun, MY Kim… - BMC Plant …, 2012 - Springer
Background R genes are a key component of genetic interactions between plants and
biotrophic bacteria and are known to regulate resistance against bacterial invasion. The …

[HTML][HTML] Insights into the plateau adaptation of Salvia castanea by comparative genomic and WGCNA analyses

L Xu, M Cao, Q Wang, J Xu, C Liu, N Ullah, J Li… - Journal of Advanced …, 2022 - Elsevier
Introduction Salvia castanea, a wild plant species is adapted to extreme Qinghai-Tibetan
plateau (QTP) environments. It is also used for medicinal purposes due to high ingredient of …

Novel disease resistance gene paralogs created by CRISPR/Cas9 in soy

ED Nagy, JL Stevens, N Yu, CS Hubmeier, N LaFaver… - Plant Cell Reports, 2021 - Springer
Key message Novel disease resistance gene paralogues are generated by targeted
chromosome cleavage of tandem duplicated NBS-LRR gene complexes and subsequent …

Common bean subtelomeres are hot spots of recombination and favor resistance gene evolution

NWG Chen, V Thareau, T Ribeiro… - Frontiers in plant …, 2018 - frontiersin.org
Subtelomeres of most eukaryotes contain fast-evolving genes usually involved in adaptive
processes. In common bean (Phaseolus vulgaris), the Co-2 anthracnose resistance (R) …

Genome Wide Analysis of Nucleotide‐Binding Site Disease Resistance Genes in Brachypodium distachyon

S Tan, S Wu - International Journal of Genomics, 2012 - Wiley Online Library
Nucleotide‐binding site (NBS) disease resistance genes play an important role in defending
plants from a variety of pathogens and insect pests. Many R‐genes have been identified in …