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[HTML][HTML] AI-driven deep learning techniques in protein structure prediction
Protein structure prediction is important for understanding their function and behavior. This
review study presents a comprehensive review of the computational models used in …
review study presents a comprehensive review of the computational models used in …
Generalized biomolecular modeling and design with RoseTTAFold All-Atom
Deep-learning methods have revolutionized protein structure prediction and design but are
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …
presently limited to protein-only systems. We describe RoseTTAFold All-Atom (RFAA), which …
Function, therapeutic potential, and inhibition of Hsp70 chaperones
Hsp70s are among the most highly conserved proteins in all of biology. Through an iterative
binding and release of exposed hydrophobic residues on client proteins, Hsp70s can …
binding and release of exposed hydrophobic residues on client proteins, Hsp70s can …
Protein complex prediction with AlphaFold-Multimer
While the vast majority of well-structured single protein chains can now be predicted to high
accuracy due to the recent AlphaFold model, the prediction of multi-chain protein complexes …
accuracy due to the recent AlphaFold model, the prediction of multi-chain protein complexes …
The structure assessment web server: for proteins, complexes and more
The 'structure assessment'web server is a one-stop shop for interactive evaluation and
benchmarking of structural models of macromolecular complexes including proteins and …
benchmarking of structural models of macromolecular complexes including proteins and …
SWISS-MODEL: homology modelling of protein structures and complexes
A Waterhouse, M Bertoni, S Bienert… - Nucleic acids …, 2018 - academic.oup.com
Homology modelling has matured into an important technique in structural biology,
significantly contributing to narrowing the gap between known protein sequences and …
significantly contributing to narrowing the gap between known protein sequences and …
[HTML][HTML] The molecular basis for sarcomere organization in vertebrate skeletal muscle
Sarcomeres are force-generating and load-bearing devices of muscles. A precise molecular
picture of how sarcomeres are built underpins understanding their role in health and …
picture of how sarcomeres are built underpins understanding their role in health and …
Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers
LJ McGuffin, NS Edmunds, AG Genc… - Nucleic acids …, 2023 - academic.oup.com
The IntFOLD server based at the University of Reading has been a leading method over the
past decade in providing free access to accurate prediction of protein structures and …
past decade in providing free access to accurate prediction of protein structures and …
The fork protection complex promotes parental histone recycling and epigenetic memory
The inheritance of parental histones across the replication fork is thought to mediate
epigenetic memory. Here, we reveal that fission yeast Mrc1 (CLASPIN in humans) binds H3 …
epigenetic memory. Here, we reveal that fission yeast Mrc1 (CLASPIN in humans) binds H3 …
New prediction categories in CASP15
Prediction categories in the Critical Assessment of Structure Prediction (CASP) experiments
change with the need to address specific problems in structure modeling. In CASP15, four …
change with the need to address specific problems in structure modeling. In CASP15, four …