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Weighted parsimony outperforms other methods of phylogenetic inference under models appropriate for morphology
One of the lasting controversies in phylogenetic inference is the degree to which specific
evolutionary models should influence the choice of methods. Model‐based approaches to …
evolutionary models should influence the choice of methods. Model‐based approaches to …
Evolution and ecology of plant architecture: integrating insights from the fossil record, extant morphology, developmental genetics and phylogenies
Background In contrast to most animals, plants have an indeterminate body plan, which
allows them to add new body parts during their lifetime. A plant's realized modular …
allows them to add new body parts during their lifetime. A plant's realized modular …
dispRity: A modular R package for measuring disparity
T Guillerme - Methods in Ecology and Evolution, 2018 - Wiley Online Library
Biological data is multivariate in essence: many traits in organisms covary with each other in
space and time. This causes biologists to either reduce these to a manageable number of …
space and time. This causes biologists to either reduce these to a manageable number of …
The phylogenetic relationships of neosuchian crocodiles and their implications for the convergent evolution of the longirostrine condition
Since their origin in the Late Triassic, crocodylomorphs have had a long history of
evolutionary change. Numerous studies examined their phylogeny, but none have …
evolutionary change. Numerous studies examined their phylogeny, but none have …
Constraining uncertainty in the timescale of angiosperm evolution and the veracity of a Cretaceous Terrestrial Revolution
Through the lens of the fossil record, angiosperm diversification precipitated a Cretaceous
Terrestrial Revolution (KTR) in which pollinators, herbivores and predators underwent …
Terrestrial Revolution (KTR) in which pollinators, herbivores and predators underwent …
Exploring the effects of weighting against homoplasy in genealogies of palaeontological phylogenetic matrices
MD Ezcurra - Cladistics, 2024 - Wiley Online Library
Although simulations have shown that implied weighting (IW) outperforms equal weighting
(EW) in phylogenetic parsimony analyses, weighting against homoplasy lacks extensive …
(EW) in phylogenetic parsimony analyses, weighting against homoplasy lacks extensive …
[HTML][HTML] Craniodental morphology and phylogeny of marsupials
The current literature on marsupial phylogenetics includes numerous studies based on
analyses of morphological data with limited sampling of Recent and fossil taxa, and many …
analyses of morphological data with limited sampling of Recent and fossil taxa, and many …
The phylogeny of early amniotes and the affinities of Parareptilia and Varanopidae
Amniotes include mammals, reptiles and birds, representing 75% of extant vertebrate
species on land. They originated around 318 million years ago in the early Late …
species on land. They originated around 318 million years ago in the early Late …
The systematics of the Cervidae: a total evidence approach
NS Heckeberg - PeerJ, 2020 - peerj.com
Systematic relationships of cervids have been controversial for decades. Despite new input
from molecular systematics, consensus could only be partially reached. The initial, gross …
from molecular systematics, consensus could only be partially reached. The initial, gross …
Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets
MR Smith - Biology letters, 2019 - royalsocietypublishing.org
Phylogenetic analysis aims to establish the true relationships between taxa. Different
analytical methods, however, can reach different conclusions. In order to establish which …
analytical methods, however, can reach different conclusions. In order to establish which …