Dynamics and function of DNA methylation in plants

H Zhang, Z Lang, JK Zhu - Nature reviews Molecular cell biology, 2018 - nature.com
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …

Comprehensive mechanism of gene silencing and its role in plant growth and development

AH El-Sappah, K Yan, Q Huang, MM Islam… - Frontiers in Plant …, 2021 - frontiersin.org
Gene silencing is a negative feedback mechanism that regulates gene expression to define
cell fate and also regulates metabolism and gene expression throughout the life of an …

RNA-directed DNA methylation

RM Erdmann, CL Picard - PLoS genetics, 2020 - journals.plos.org
RNA-directed DNA methylation (RdDM) is a biological process in which non-coding RNA
molecules direct the addition of DNA methylation to specific DNA sequences. The RdDM …

The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci

ZW Liu, CR Shao, CJ Zhang, JX Zhou, SW Zhang… - PLoS …, 2014 - journals.plos.org
RNA-directed DNA methylation (RdDM) is required for transcriptional silencing of
transposons and other DNA repeats in Arabidopsis thaliana. Although previous research …

The RNAs of RNA-directed DNA methylation

JM Wendte, CS Pikaard - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
RNA-directed chromatin modification that includes cytosine methylation silences
transposable elements in both plants and mammals, contributing to genome defense and …

The role of long non-coding RNA in transcriptional gene silencing

AT Wierzbicki - Current opinion in plant biology, 2012 - Elsevier
Transcriptional gene silencing controls the activity of transposable elements and expression
of protein-coding genes. It requires non-coding transcription, which in plants is performed by …

PRL1, an RNA-binding protein, positively regulates the accumulation of miRNAs and siRNAs in Arabidopsis

S Zhang, Y Liu, B Yu - PLoS genetics, 2014 - journals.plos.org
The evolutionary conserved WD-40 protein PRL1 plays important roles in immunity and
development. Here we show that PRL1 is required for the accumulation of microRNAs …

siRNA-directed DNA methylation in plants

M **e, B Yu - Current genomics, 2015 - ingentaconnect.com
DNA cytosine methylationis an important epigenetic process that is correlated with
transgene silencing, transposon suppression, and gene imprinting. In plants, small …

RNA‐directed DNA methylation requires stepwise binding of silencing factors to long non‐coding RNA

G Böhmdorfer, MJ Rowley, J Kuciński, Y Zhu… - The Plant …, 2014 - Wiley Online Library
Ribonucleic acid‐mediated transcriptional gene silencing (known as RNA‐directed DNA
methylation, or Rd DM, in A rabidopsis thaliana) is important for influencing gene expression …

A transcription fork model for pol IV and pol v–dependent RNA-directed DNA methylation

CS Pikaard, JR Haag, OMF Pontes… - Cold Spring Harbor …, 2012 - symposium.cshlp.org
In Arabidopsis thaliana, nuclear multisubunit RNA polymerase IV (Pol IV) and RNA-
DEPENDENT RNA POLYMERASE 2 (RDR2) are required for the biogenesis of 24 …