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MetaTransformer: deep metagenomic sequencing read classification using self-attention models
A Wichmann, E Buschong, A Müller… - NAR Genomics and …, 2023 - academic.oup.com
Deep learning has emerged as a paradigm that revolutionizes numerous domains of
scientific research. Transformers have been utilized in language modeling outperforming …
scientific research. Transformers have been utilized in language modeling outperforming …
CARE 2.0: reducing false-positive sequencing error corrections using machine learning
F Kallenborn, J Cascitti, B Schmidt - BMC bioinformatics, 2022 - Springer
Background Next-generation sequencing pipelines often perform error correction as a
preprocessing step to obtain cleaned input data. State-of-the-art error correction programs …
preprocessing step to obtain cleaned input data. State-of-the-art error correction programs …
Two-Phase Flow Pattern Identification in Vertical Pipes Using Transformer Neural Networks
The oil and gas industry consistently embraces innovative technologies due to the
significant expenses associated with hydrocarbon transportation, pipeline corrosion issues …
significant expenses associated with hydrocarbon transportation, pipeline corrosion issues …
DeepAS–Chemical language model for the extension of active analogue series
A Yoshimori, J Bajorath - Bioorganic & Medicinal Chemistry, 2022 - Elsevier
In medicinal chemistry, hit-to-lead and lead optimization efforts produce analogue series
(ASs), the analysis of which is of central relevance for the exploration and exploitation of …
(ASs), the analysis of which is of central relevance for the exploration and exploitation of …
MAC-ErrorReads: machine learning-assisted classifier for filtering erroneous NGS reads
Background The rapid advancement of next-generation sequencing (NGS) machines in
terms of speed and affordability has led to the generation of a massive amount of biological …
terms of speed and affordability has led to the generation of a massive amount of biological …
Sample Efficient Bayesian Learning of Causal Graphs from Interventions
Z Zhou, MQ Elahi, M Kocaoglu - ar** Bioanalytical Methods to Sequence the Guanine Oxidation Product 8-Oxo-7, 8-Dihydroguanine in RNA
NJ Mathewson - 2022 - search.proquest.com
RNA is susceptible to oxidative damage caused by reactive oxygen species (ROS).
Exposure to ROS can result in modifications to RNA. My interests lie in guanine (G) oxidative …
Exposure to ROS can result in modifications to RNA. My interests lie in guanine (G) oxidative …